spacer

Structural Information for 1dii

The following displays the crystal structure (as found in 1dii, the primary PDB code for the entry) with each catalytic domain highlighted. The catalytic residues are also highlighed in teal and shown in wireframe depiction. Domains which are not classified as catalytic are shown in grey.

This enzyme has 2 catalytic sites (as determined by the Catalytic Site Atlas), only one of which is shown highlighed by CATH domain.
Site 1 covers chain A.
Site 2 covers chain B.


The Catalytic Domains:

The Catalytic Residues

The following shows the catalytic residues (the catalytic residue in focus is labelled in red) and the residues which are donating hydrogen bonds (labelled in blue) and accepting hydrogen bonds (labelled in green).

Asp 167 A

Residues Contacting Asp167A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
35.2737
(0.7998)
34.6 5 2

Glu 177 A

Residues Contacting Glu177A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
16.76
(0.8745)
53.6 5 1

Glu 286 A

Residues Contacting Glu286A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
38.9122
(0.184)
28.1 5 1

Tyr 367 A

Residues Contacting Tyr367A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
30.4141
(0.1189)
16.3 3 4

Glu 380 A

Residues Contacting Glu380A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
6.7922
(0.4003)
0 5 1

Tyr 384 A

Residues Contacting Tyr384A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
18.6216
(0.6919)
42.5 3 2

His 436 A

Residues Contacting His436A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
40.803
(0.6)
5.8 2 2

Tyr 473 A

Residues Contacting Tyr473A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
35.8925
(0.4709)
10.6 3 2

Arg 474 A

Residues Contacting Arg474A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
13.9536
(0.2703)
9.3 1 4

Arg 512 A

Residues Contacting Arg512A

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
20.429
(0.6805)
45.4 1 2

Ala 649 C

Residues Contacting Ala649C

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
32.838
(0.382)
25.1 1 1

Met 650 C

Residues Contacting Met650C

B Factor
(normalised)
Relative Solvent Accessibility Number of H-Bond Donors Number of H-Bond Acceptors
30.1587
(0.2769)
24.3 1 1

spacer
spacer