Publications

Publications

2016

Erratum to: Single cell analysis of CD4+ T cell differentiation reveals three major cell states and progressive acceleration of proliferation.
Proserpio V, Piccolo A, Haim-Vilmovsky L, Kar G, Lönnberg T, Svensson V, Pramanik J, Natarajan KN, Zhai W, Zhang X, Donati G, Kayikci M, Kotar J, McKenzie AN, Montandon R, James KR, Fernandez-Ruiz D, Heath WR, Haque A, Billker O, Woodhouse S, Cicuta P, Nicodemi M, Teichmann SA.
Genome biology Volume 17 (2016) p.133

Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation.
Proserpio V, Piccolo A, Haim-Vilmovsky L, Kar G, Lönnberg T, Svensson V, Pramanik J, Natarajan KN, Zhai W, Zhang X, Donati G, Kayikci M, Kotar J, McKenzie AN, Montandon R, Billker O, Woodhouse S, Cicuta P, Nicodemi M, Teichmann SA.
Genome biology Volume 17 (2016) p.103

T cell fate and clonality inference from single-cell transcriptomes.
Stubbington MJ, Lönnberg T, Proserpio V, Clare S, Speak AO, Dougan G, Teichmann SA.
Nature methods Volume 13 (2016) p.329-332

Single-cell technologies are revolutionizing the approach to rare cells.
Proserpio V, Lönnberg T.
Immunology and cell biology Volume 94 (2016) p.225-229

Cutting-edge single-cell genomics and modelling in immunology.
Proserpio V, Lönnberg T.
Immunology and cell biology Volume 94 (2016) p.224

2013

T-cell activation induces selective changes of cellular lipidome.
Lonnberg T, Yetukuri L, Seppanen-Laakso T, Lahesmaa R, Oresic M.
Frontiers in bioscience (Elite edition) Volume 5 (2013) p.558-573

Global chromatin state analysis reveals lineage-specific enhancers during the initiation of human T helper 1 and T helper 2 cell polarization.
Hawkins RD, Larjo A, Tripathi SK, Wagner U, Luu Y, Lönnberg T, Raghav SK, Lee LK, Lund R, Ren B, Lähdesmäki H, Lahesmaa R.
Immunity Volume 38 (2013) p.1271-1284

From a gene-centric to whole-proteome view of differentiation of T helper cell subsets.
Lönnberg T, Chen Z, Lahesmaa R.
Briefings in functional genomics Volume 12 (2013) p.471-482

Holistic systems biology approaches to molecular mechanisms of human helper T cell differentiation to functionally distinct subsets.
Chen Z, Lönnberg T, Lahesmaa R.
Scandinavian journal of immunology Volume 78 (2013) p.172-180