Publications

Found 156 results
Filters: Author is Birney, E.  [Clear All Filters]
2012
Spivakov M, Akhtar J, Kheradpour P, et al. "Analysis of variation at transcription factor binding sites in Drosophila and humans." Genome biology. 2012;13:R49.
Lee BK, Bhinge AA, Battenhouse A, et al. "Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells." Genome research. 2012;22:9-24.
Yip KY, Cheng C, Bhardwaj N, et al. "Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors." Genome biology. 2012;13:R48.
Cochrane G, Cook CE, Birney E. "The future of DNA sequence archiving." GigaScience. 2012;1:2.
Cochrane G, Cook CE, Birney E. "The future of sequence archiving." GigaScience. 2012;1.
ENCODE Project Consortium T, Dunham I, Birney E, et al. "An integrated encyclopedia of DNA elements in the human genome.". 2012.
Hoffman MM, Ernst J, Wilder SP, et al. "Integrative annotation of chromatin elements from ENCODE data." Genome Res. 2012.
Amid C, Birney E, Bower L, et al. "Major submissions tool developments at the European Nucleotide Archive." Nucleic Acids Res. 2012;40:D43-7.
Amid C, Birney E, Bower L, et al. "Major submissions tool developments at the European nucleotide archive." Nucleic acids research. 2012;40:D43-D47.
Birney E. "The making of ENCODE: Lessons for big-data projects." Nature. 2012;489:49-51.
Dong X, Greven MC, Kundaje A, et al. "Modeling gene expression using chromatin features in various cellular contexts." Genome biology. 2012;13:R53.
Schulz MH, Zerbino DR, Vingron M, Birney E. "Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels." Bioinformatics. 2012;28:1086-1092.
Ware JS, Walsh R, Cunningham F, Birney E, Cook SA. "Paralogous annotation of disease-causing variants in long QT syndrome genes." Human Mutation. 2012.
Junion G, Spivakov M, Girardot C, et al. "A transcription factor collective defines cardiac cell fate and reflects lineage history." Cell. 2012;148:473-486.

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