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HUPO PPP2 Data sets

HUPO Human Plasma Proteome Project 2 (PPP-2)

The HUPO PPP-2 attempts to collate data obtained from human plasma into a coherent and complete description of the human plasma proteome in health and disease states.

Selected References: 19053147.

If interested, please download basic and detailed guidelines which describe how to perform a HUPO PPP2 submission to PRIDE.

 

Datasets

Study
PI
lab
PMID
Sample
Biological specimen
Unique proteins
Unique peptides
Spectra
Accession numbers
Trauma patients vs Normals, EDTA-plasma, multipeptide proteins and N-glycoproteins
Richard Smith
PNNL
Liu et al., MCP, 2006, 16684767
EDTA plasma
Pooled sample (Disease and normal samples)
7,025
20,671
4,265,659
Normal EDTA-plasma N-glycoproteins
Richard Smith
PNNL
Liu et al., JPR, 2005, 16335952
EDTA plasma
7,826
7,961
675,871
Normal human EDTA-plasma after extensive depletion
Richard Smith
PNNL
Qian et al., MCP, 2008, 18632595
EDTA plasma
14,206
16,990
902,303

 

 


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