PRIDE tools and libraries

PRIDE offers a collection of tools and libraries to handle Mass Spectrometry (MS)-based proteomics data. 

Tools

Tool
Description
Publication
Access

PRIDE Inspector

An integrated desktop application for visualizinig and analyzing MS dataset (such as: mzML, PRIDE XML and mzIdentML). PRIDE Inspector: a tool to visualize and validate MS proteomics data Download
PRIDE Converter 2 An open source tool that converts MS data into valid PRIDE XML The PRIDE Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium Download
ProteomeXchange Submission Tool An free tool that assists you with the ProteomeXchange submission Not published Download
PICR The Protein Identifier Cross-Reference (PICR) service is a web application that provides interactive and programmatic (SOAP and REST) access to a mapping algorithm based on 100% sequence identity to proteins from over 98 distinct source databases The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases View

 

Libraries for file formats

 

Other Libraries