PRIDE Archive Help Overview
Please consult the About page if you'd like to see a concise summary of PRIDE. You can ask specific questions over at the FAQ.
I'd like to submit data
I'd like to use PRIDE tools
You might want to try the following:
- Generate mzIdentML files for Complete Submisisons
- Generate PRIDE XML files for Complete Submisisons
- Using Aspera for transferring big datasets
- Check the Train online tutorial
- If you still have more questions, please visit our FAQ section
You might like to use the following tools amongst others:
- PRIDE Inspector for visualizing and analysing data as a scientist
- PX submission Tool to submit data to ProteomeXchange via PRIDE
- Using the jmzIdentML library for parsing as a developer
- I want to use the ms-data-core-api, to handle mzIdentML, PRIDE XML, mzTab and/or different mass spectra data formats
- If you still have more questions, please visit our FAQ section
You might like to ask the following questions amongst others:
- What kind of terms can be used in basic search?
- How can search queries be sorted?
- How can search queries be filtered?
- How can you browse all PRIDE Archive results?
- Which data contained in the submitted files are accessible through the web interface and WS?
- See also our dedicated 'PRIDE dataset tags' page to learn how to use dataset tags.
- If you still have more questions, please visit our FAQ section