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Biomedical

The human plasma proteome before and after remote ischemic preconditioning
Species: Homo sapiens (Human)
Project description: Six healthy male adults underwent RIPC, consisting of 3x5 min cy (More)
Made public: 2014-09-16
Human Primary T-cells Phospoproteomic WorkFlow
Species: Homo sapiens (Human)
Project description: LymPHOS workflow: a collection of open source tools for mass spe (More)
Made public: 2014-09-16
CPTAC System Suitability (CompRef) Study: Proteome, VU
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: The objective of the "System Suitability (CompRef) Study" was to (More)
Made public: 2014-09-16
CPTAC System Suitability (CompRef) Study: Phosphoproteome, PNNL
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: The objective of the "System Suitability (CompRef) Study" was to (More)
Made public: 2014-09-16
CPTAC System Suitability (CompRef) Study: Proteome, PNNL
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: The objective of the "System Suitability (CompRef) Study" was to (More)
Made public: 2014-09-16
C-terminal Domain Small Phosphatase 1 and MAP kinase reciprocally control REST stability and neuronal differentiation.
Species: Rattus norvegicus (Rat)
Project description: The RE1 Silencing Transcription Factor (REST) in stem cells repr (More)
Made public: 2014-09-15
Determination of Supplier-To-Supplier and Lot-To-Lot Variability in Glycation of Recombinant Human Serum Albumin Expressed in Oryza sativa
Species: Homo sapiens (Human)
Project description: In studies presented here, recombinant human serum albumins (rHS (More)
Made public: 2014-09-12
Relative protein quantification in mouse hippocampal synaptosomes during aging series
Species: Mus musculus (Mouse)
Project description: Age-related cognitive decline is a serious health concern in our (More)
Made public: 2014-09-10
Comprehensive phosphoproteome analysis unravels the core signaling network that initiates the earliest synapse pathology in preclinical Alzheimer's disease brain
Species: Mus musculus (Mouse)
Project description: Using a high-end mass spectrometry, we screened phosphoproteins (More)
Made public: 2014-09-10
N-glycosylation site occupancy in human prostaglandin H synthases expressed in Pichia pastoris
Species: Homo sapiens (Human) Komagataella pastoris (Yeast) (Pichia pastoris)
Project description: Prostaglandin H synthases (PGHSs) are N-glycosylated membrane pr (More)
Made public: 2014-08-18
Identification of SUMO sites by LC-MSMS
Species: Homo sapiens (Human)
Project description: We developed a novel method for the identification of SUMO sites (More)
Made public: 2014-07-29
Identification of ERK1 direct substrates using stable isotope labeled kinase assay linked phosphoproteomics
Species: Homo sapiens (Human)
Project description: Following the kinase assay linked phosphoproteomics strategy (KA (More)
Made public: 2014-07-17
Basement Membranes from Human Retinal Blood Vessels, Inner Limiting Membranes, and Lens Capsules
Species: Homo sapiens (Human)
Project description: Three types of BMs from adult human eyes, the inner limiting mem (More)
Made public: 2014-07-16
Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine and Human-associated Staphylococcus epidermidis
Species: Staphylococcus epidermidis
Project description: The goal of the present study is to understand mechanisms by whi (More)
Made public: 2014-07-15
CNB Lipid Rafts reAnalysis.
Species: Homo sapiens (Human)
Project description: This dataset represents an example for a textbook: Genomics and (More)
Made public: 2014-07-14
Development and performance evaluation of an ultra-low flow nano liquid chromatography-tandem mass spectrometry set-up
Species: Homo sapiens (Human)
Project description: Liquid chromatography-tandem mass spectrometry (LC-MS/MS) is the (More)
Made public: 2014-07-10
Nano HPLC Chip Ion Trap MS/MS of human pancreatic cancer cells
Species: Homo sapiens (Human)
Project description: Proteins extracted from Panc1 cells (untreated or treated with A (More)
Made public: 2014-07-10
Differentially embedded glioblastoma tumor protein quantitation
Species: Homo sapiens (Human)
Project description: Glioblastoma multiforme (GBM) is the most aggressive malignant p (More)
Made public: 2014-07-09
V5-tagged LIMD1 in HEK293 cells with or without JNK2 activation
Species: Homo sapiens (Human)
Project description: The experiment was conducted to identify JNK phosphorylation sit (More)
Made public: 2014-07-09
pTyr-CoIP HP/AGS
Species: Homo sapiens (Human)
Project description: Quantitative analysis of H. pylori induced phosphotyrosine signa (More)
Made public: 2014-07-09
Phosphoproteomics combined with quantitative 14-3-3-affinity capture identifies SIRT1 and RAI as new regulators of cytosolic dsRNA-induced innate immune response
Species: Homo sapiens (Human)
Project description: In this study, we have used global phosphoproteomic analysis to (More)
Made public: 2014-07-08
Proteomic profiling of MDC1A muscle using TMT quantitation, Bruno Oliveira
Species: Mus musculus (Mouse)
Project description: SUMMARY Congenital muscular dystrophy with laminin á2 chain-defi (More)
Made public: 2014-07-08
Redox-state of pentraxin 3 as a novel biomarker for resolution of inflammation and survival in sepsis
Species: Mus musculus (Mouse)
Project description: In an endotoxaemic mouse model of sepsis, a tissue-based proteom (More)
Made public: 2014-07-01
Proteomics of TGF beta signaling
Species: Homo sapiens (Human)
Project description: HaCaT cells were treated with TGF beta1 for different time point (More)
Made public: 2014-07-01
HCMV-NEC analysis
Species: Homo sapiens (Human) Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5)
Project description: Herpesviral capsids are assembled in the host cell nucleus befor (More)
Made public: 2014-06-30
Rescue of disrupted mechanotransduction as a new therapeutic strategy in human dilated cardiomyopathy
Species: Mus musculus (Mouse)
Project description: Determine proteins interacting with ILK in transgenic mouse hear (More)
Made public: 2014-06-26
Reconstructing targetable pathways in lung cancer by integrating diverse omics data
Species: Homo sapiens (Human)
Project description: We profile transcriptome, proteome and phosphoproteome in a pane (More)
Made public: 2014-06-24
Comparative Proteome Profiling of Bovine and Human Staphylococcus epidermidis Strains to Search for Cell-surface Bound Factors with Plausible Roles in Virulence or Adaptation
Species: Staphylococcus epidermidis
Project description: Here, we analyse two SE strains, an infectious bovine strain PM2 (More)
Made public: 2014-06-10
Human Adenovirus 5 (HAdV5), LC-MSMS
Species: Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5)
Project description: Using high-resolution mass spectrometry (MS)-based proteomics in (More)
Made public: 2014-06-09
Macro-porous Reversed Phase Separation of Proteins Combined with Reversed Phase Separation of Phosphopeptides and Tandem Mass Spectrometry for Profiling the Phosphoproteome of MDA-MB-231 cells
Species: Homo sapiens (Human)
Project description: A new method of combining macro-porous reversed phase (mRP) prot (More)
Made public: 2014-06-06
Phosphoproteomics of MuSK Signaling
Species: Mus musculus (Mouse)
Project description: The development of the neuromuscular synapse depends on signalin (More)
Made public: 2014-06-05
Phosphoproteomics of MuSK Signaling
Species: Mus musculus (Mouse)
Project description: The development of the neuromuscular synapse depends on signalin (More)
Made public: 2014-06-05
Comparative Exoprotein Profiling of Different Staphylococcus epidermidis strains Reveals Potential Link between Non-classical Protein Export and Virulence
Species: Staphylococcus epidermidis
Project description: This study reports global exoproteome profiling of bovine mastit (More)
Made public: 2014-06-04
iPSC-derived neurons from GBA1-associated Parkinson's disease patients show autophagic/lysosomal dysfunction and impaired calcium homeostasis
Species: Homo sapiens (Human)
Project description: Mutations in the acid β-glucocerebrosidase (GBA1) gene, responsi (More)
Made public: 2014-06-03
Insight into the protein composition of immunoglobulin light chain deposits of eyelid, orbital, and conjunctival amyloidosis.
Species: Homo sapiens (Human)
Project description: Amyloidosis is a disorder characterized by the formation of extr (More)
Made public: 2014-05-29
Mass spectrometry based draft of the human proteome
Species: Homo sapiens (Human)
Project description: This PXD project contains two projects published on ProteomicsDB (More)
Made public: 2014-05-28
Proteomics of Fuchs Endothelial Corneal Dystrophy support that the extracellular matrix of Descemet¹s membrane is Disordered
Species: Homo sapiens (Human)
Project description: Fuchs’ endothelial corneal dystrophy is major corneal disorder i (More)
Made public: 2014-05-27
Analyses of the Xylem Sap Proteomes Identified Candidate Fusarium virguliforme Proteinacious Toxins
Species: Glycine max (Soybean) (Glycine hispida) Fusarium virguliforme
Project description: Sudden death syndrome (SDS) is caused by the ascomycete fungus, (More)
Made public: 2014-05-23
Rat prefrontal cortex LC-MS/MS
Species: Rattus norvegicus (Rat)
Project description: The prefrontal cortex is greatly associated with a wide range of (More)
Made public: 2014-05-13
Probing tyrosine kinase inhibitors specificity
Species: Homo sapiens (Human)
Project description: Using a three-pronged MS-based proteomic approach, we assessed t (More)
Made public: 2014-05-12
Melanoma metastases: association between S100A13 expression and chemotherapy resistance
Species: Homo sapiens (Human)
Project description: Here we have performed quantitative profiling of the proteome of (More)
Made public: 2014-04-25
Leishmania donovani phosphoproteome during differentiation and as a response to environmental signals
Species: Leishmania donovani
Project description: Changes Leishmania donovani phosphoproteome during promastigote- (More)
Made public: 2014-04-24
Proteomic identification of anti-tetanus toxoid antibodies from human serum (HD1)
Species: Homo sapiens (Human)
Project description: Proteomic identification and characterization of antibodies comp (More)
Made public: 2014-04-24
Proteomic identification of monoclonal antibodies from rabbit serum and analysis of FDR using differential cysteine labeling
Species: Oryctolagus cuniculus (Rabbit)
Project description: Proteomic analysis of serum antibodies is challenging due to the (More)
Made public: 2014-04-24
Glycoprotein Signatures for Aggressive Prostate Cancer via SWATH mass spectrometry
Species: Homo sapiens (Human)
Project description: The identification of biomarkers indicating the level of aggress (More)
Made public: 2014-04-23
Mitochondrial proteomics investigation of a cellular model of impaired dopamine homeostasis, an early step in Parkinson's disease pathogenesis
Species: Homo sapiens (Human)
Project description: Impaired dopamine homeostasis is an early event in the pathogene (More)
Made public: 2014-04-15
VEGF Study in Primary Human Endothelial Cells
Species: Homo sapiens (Human)
Project description: The process of angiogenesis is under complex regulation in adult (More)
Made public: 2014-04-15
Proteomics analysis of wound healing in porcine subcutaneous fatty tissue postmonopolar electrosurgery and harmonic blade incisions.
Species: Sus scrofa domesticus (domestic pig)
Project description: Two female pigs weighing 40-55 kg were used. Each animal had fou (More)
Made public: 2014-04-15
Proteomic profiling of colorectal adenomas
Species: Homo sapiens (Human)
Project description: Colorectal adenomas are cancer precursor lesions of the large bo (More)
Made public: 2014-04-03
Membrane proteomic analysis of colorectal cancer tissue
Species: Homo sapiens (Human)
Project description: We performed shotgun proteomics of colorectal cancer tissue and (More)
Made public: 2014-04-02
Lung cancer and Normal Lung Tissue LC-MS/MS
Species: Homo sapiens (Human)
Project description: The Chromosome-centric Human Proteome Project (C-HPP) was recent (More)
Made public: 2014-03-18
Colon cancer stem cell over-expressing TAp63α
Species: Homo sapiens (Human)
Project description: p63, a member of p53 family, is transcribed in different variant (More)
Made public: 2014-03-17
Colon cancer stem cell over-expressing ΔNp63α
Species: Homo sapiens (Human)
Project description: p63, a member of p53 family, is transcribed in different variant (More)
Made public: 2014-03-17
Proteomic analysis of Giardia lamblia ESV and PV organelle enriched fractions
Species: Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia)
Project description: The protozoan Giardia lamblia is a unique biological model to in (More)
Made public: 2014-03-11
Transcriptomic and Proteomic Response of HC-04 to hepatocyte growth factor (HGF)
Species: Homo sapiens (Human)
Project description: The routine study of human malaria liver-stage biology in vitro (More)
Made public: 2014-02-17
A Targeted in Vivo SILAC Approach for Quantification of Drug Metabolism Enzymes: Regulation by the Constitutive Androstane Receptor
Species: Mus musculus (Mouse)
Project description: The modulation of drug metabolism enzyme (DME) expression by the (More)
Made public: 2014-02-14
Quantitative phosphoproteomics unveils temporal dynamics of thrombin signaling in human endothelial cells
Species: Homo sapiens (Human)
Project description: Thrombin is the key serine protease of the coagulation cascade a (More)
Made public: 2014-02-06
Human dental calculus LC-MS/MS
Species: Homo sapiens (Human) Bos taurus (Bovine) Ovis
Project description: The purpose of this study was to investigate oral microbiome and (More)
Made public: 2014-01-29
In-depth proteomic analyses of ovarian cancer cell line exosomes reveals differential enrichment of functional categories compared to the NCI 60 proteome.
Species: Homo sapiens (Human)
Project description: Molecular communication between cancer cells and its stromal mic (More)
Made public: 2014-01-22
Shotgun Imaging Analyzer Gastric Cancer
Species: Homo sapiens (Human)
Project description: The data discloses mass spectra of a gastric cancer biopsy secti (More)
Made public: 2013-12-05
Mycobacterium tuberculosis under starvation
Species: Mycobacterium tuberculosis H37Rv
Project description: Mycobacterium tuberculosis was grown in Middlebrook 7H9 medium s (More)
Made public: 2013-11-22
SWATH analysis of 1433B_HUMAN affinity purifications from HEK293 cells after time course treatment with IGF1
Species: Homo sapiens (Human)
Project description: Protein complexes and protein interaction networks are essential (More)
Made public: 2013-09-25
In vivo SILAC-based proteomics reveals phosphoproteome changes during mouse skin carcinogenesis
Species: Mus musculus (Mouse)
Project description: Cancer progresses through distinct stages and mouse models recap (More)
Made public: 2013-03-13
Proteomic and phosphoproteomic data of colorectal cancer tissues and cells for Chromosome-Centric Human Proteome Project
Species: Homo sapiens (Human)
Project description: Protein extraction and proteolytic digestion were performed usin (More)
Made public: 2013-01-11
In-depth membrane proteomic study of breast cancer tissues
Species: Homo sapiens (Human)
Project description: Proteomics on Human breast cancer tissue samples. 9 patients wit (More)
Made public: 2013-01-08