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Summary

Title

Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Ramos Cell line.

Description

The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the Ramos cell line. 3 laboratories contributed to compile all the reported data.

Sample Processing Protocol

See details in reference PMID : 24138474

Data Processing Protocol

See details in reference PMID : 24138474

Contact

J. Alberto Medina-Aunon, Proteomics - Bioinformatics

Submission Date

03/09/2013

Publication Date

05/09/2013

Publication

    Segura V, Medina-Aunon JA, Mora MI, Martínez-Bartolomé S, Abian J, Aloria K, Antúnez O, Arizmendi JM, Azkargorta M, Barceló-Batllori S, Beaskoetxea J, Bech-Serra JJ, Blanco F, Monteiro MB, Cáceres D, Canals F, Carrascal M, Casal JI, Clemente F, Colomé N, Dasilva N, Díaz P, Elortza F, Fernández-Puente P, Fuentes M, Gallardo O, Gharbi SI, Gil C, González-Tejedo C, Hernáez ML, Lombardía M, Lopez-Lucendo M, Marcilla M, Mato JM, Mendes M, Oliveira E, Orera I, Pascual-Montano A, Prieto G, Ruiz-Romero C, Sánchez Del Pino MM, Tabas-Madrid D, Valero ML, Vialas V, Villanueva J, Albar JP, Corrales FJ; Surfing Transcriptomic Landscapes. A Step beyond the Annotation of Chromosome 16 Proteome., J Proteome Res, 2013 Nov 5, PubMed(s) : 24138474

Assay

Showing 1 - 3 of 3 results
# Accession Title Proteins Peptides Unique Peptides Spectra Identified Spectra View in Reactome
1 31039 SPHPP_PCB_SG_Ramos_curated_FDR1_protein 3984 37598 7115 175965 17725
2 31040 SPHPP_CIC_RAMOS_OT_GEL_NewS_FDR_1protein_curated 2846 13394 3402 35672 5982
3 31041 SPHPP_CIB_RAMOS_ProteinGrouping 5294 70239 11595 318227 38224