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Summary

Title

Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Jurkat Cell line.

Description

The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the Jurkat cell line. 2 laboratories contributed to compile all the reported data.

Sample Processing Protocol

See details in reference(s) : 24138474

Data Processing Protocol

See details in reference(s) : 24138474

Contact

J. Alberto Medina-Aunon, Proteomics - Bioinformatics

Submission Date

03/09/2013

Publication Date

05/09/2013

Publication

    Segura V, Medina-Aunon JA, Mora MI, Martínez-Bartolomé S, Abian J, Aloria K, Antúnez O, Arizmendi JM, Azkargorta M, Barceló-Batllori S, Beaskoetxea J, Bech-Serra JJ, Blanco F, Monteiro MB, Cáceres D, Canals F, Carrascal M, Casal JI, Clemente F, Colomé N, Dasilva N, Díaz P, Elortza F, Fernández-Puente P, Fuentes M, Gallardo O, Gharbi SI, Gil C, González-Tejedo C, Hernáez ML, Lombardía M, Lopez-Lucendo M, Marcilla M, Mato JM, Mendes M, Oliveira E, Orera I, Pascual-Montano A, Prieto G, Ruiz-Romero C, Sánchez Del Pino MM, Tabas-Madrid D, Valero ML, Vialas V, Villanueva J, Albar JP, Corrales FJ; Surfing Transcriptomic Landscapes. A Step beyond the Annotation of Chromosome 16 Proteome., J Proteome Res, 2013 Nov 5, PubMed: 24138474

Assay

Showing 1 - 2 of 2 results
# Accession Title Proteins Peptides Unique Peptides Spectra Identified Spectra View in Reactome
1 31019 SPHPP_UPV_JURKAT_QE_CHAPS_RPB_R1_curated_FDR1_protein 13102 292868 42521 522080 147333
2 31020 SPHPP_CNB_JURKAT_TT_CHAPS_RPB_R1_PG_curated 11796 186820 38611 727488 95784