PRIDE Archive - proteomics data repository

The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a single point for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to PRIDE via ProteomeXchange and are handled by expert biocurators.

Submit data: PX Submission Tool
MS/MS Proteomics Submission Desktop Tool
Tools: PRIDE Inspector
Distribution of Precursos Ion Masses
Access data: Proteome Central
Accessible ProteomeXchange datasets
Tools: PRIDE Inspector
Protein Table
Access data: PRIDE Archive Web Service
Swagger Documentation
Tools: PRIDE Inspector
Protein Inference
Tools: PRIDE Inspector
Quantitation View
Access data: PRIDE Archive
Results Page
Tools: PRIDE Inspector
Protein Details
Access data: PRIDE Archive Web Service
JSON Output

Datasets

  • 7016 projects
  • 71169 assays

News

Jul 25
Additionally, PRIDE has also been included in the @ELIXIREurope list of deposition databases for bimolecular data. link
Jul 25
RT @drzoomie: Jo McEntyre on Identifying Core Data Resources and Deposition Databases #ISMBECCB #ISMB2017 @NCI_NCIP @ELIXIREurope #FAIRpri…
Jul 25
The complete list of resources is available at link
Jul 25
PRIDE has just been listed as one of @ELIXIREurope core data resources! Thanks to all our users! Data sharing in #proteomics is on the rise!
More news

Submit data

Submit data: we welcome direct submissions of MS/MS proteomics datasets.

ProteomeXchange: accepts both MS/MS proteomics submissions and SRM submissions. PRIDE is the official entry point for MS/MS proteomics submissions.

Access data

Browse: explore all public datasets currently available in our repository.

Web Service: Use the PRIDE Archive web services to get programmatic access to data in the PRIDE repository.

Download: our servers provide data files via FTP, Aspera and HTTP.

Tools

PRIDE Inspector: a desktop application for visualizinig and analyzing MS dataset, such as: mzML, mzIdentML, PRIDE XML.

PRIDE Converter: converts common mass spectrometry data formats into PRIDE XML.