PDBsum entry 5ivp

Hydrolase

PDB id: 5ivp

Contents

Protein chains

196 a.a.

Ligands

FLC ×2

Waters ×122

PDB id:

5ivp

Name:

Hydrolase

Title:

Crystal structure of the peptidyl-tRNA hydrolase from vibrio cholerae in the c121 space group at ph 6.5

Structure:

Peptidyl-tRNA hydrolase. Chain: a, b. Synonym: pth. Engineered: yes

Source:

Vibrio cholerae o1 biovar el tor str. N16961. Organism_taxid: 243277. Strain: atcc 39315 / el tor inaba n16961. Gene: pth, vc_2184. Expressed in: escherichia coli. Expression_system_taxid: 866768.

Resolution:

2.01Å R-factor: 0.164 R-free: 0.224

Authors:

S.Shahid,A.Kabra,R.K.Pal,A.Arora

Key ref:

S.Shahid et al. Crystal structure of the peptidyl-Trna hydrolase from cholerae in the c121 space group at ph 6.5. To be published, .

Date:

21-Mar-16 Release date: 22-Mar-17

Protein chains

Q9KQ21  (PTH_VIBCH) -  Peptidyl-tRNA hydrolase from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

Seq: 196 a.a.

Struc: 196 a.a.*

* PDB and UniProt seqs differ at 2 residue positions (black crosses)

Enzyme reactions

• Enzyme class: E.C.3.1.1.29 - peptidyl-tRNA hydrolase.
• Reaction: an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H⁺

Molecule diagrams generated from .mol files obtained from the KEGG ftp site