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PDBsum entry 5d2c

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protein ligands metals Protein-protein interface(s) links
Metal binding protein PDB id
5d2c

 

 

 

 

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Contents
Protein chains
128 a.a.
Ligands
BEF ×2
IMD ×5
GOL ×5
SO4
Metals
_MN ×2
Waters ×221
PDB id:
5d2c
Name: Metal binding protein
Title: Reaction of phosphorylated chey with imidazole 1 of 3
Structure: Chemotaxis protein chey. Chain: a, b. Engineered: yes. Mutation: yes
Source: Escherichia coli o157:h7. Organism_taxid: 83334. Gene: chey, z2936, ecs2592. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.06Å     R-factor:   0.162     R-free:   0.185
Authors: S.Page,R.E.Silversmith,R.B.Bourret,E.J.Collins
Key ref: S.C.Page et al. (2015). Imidazole as a Small Molecule Analogue in Two-Component Signal Transduction. Biochemistry, 54, 7248-7260. PubMed id: 26569142
Date:
05-Aug-15     Release date:   09-Mar-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P0AE68  (CHEY_ECO57) -  Chemotaxis protein CheY from Escherichia coli O157:H7
Seq:
Struc:
129 a.a.
128 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Biochemistry 54:7248-7260 (2015)
PubMed id: 26569142  
 
 
Imidazole as a Small Molecule Analogue in Two-Component Signal Transduction.
S.C.Page, R.E.Silversmith, E.J.Collins, R.B.Bourret.
 
  ABSTRACT  
 
In two-component signal transduction systems (TCSs), responses to stimuli are mediated through phosphotransfer between protein components. Canonical TCSs use His → Asp phosphotransfer in which phosphoryl groups are transferred from a conserved His on a sensory histidine kinase (HK) to a conserved Asp on a response regulator (RR). RRs contain the catalytic core of His → Asp phosphotransfer, evidenced by the ability of RRs to autophosphorylate with small molecule analogues of phospho-His proteins. Phosphorelays are a more complex variation of TCSs that additionally utilize Asp → His phosphotransfer through the use of an additional component, the histidine-containing phosphotransfer domain (Hpt), which reacts with RRs both as phosphodonors and phosphoacceptors. Here we show that imidazole has features of a rudimentary Hpt. Imidazole acted as a nucleophile and attacked phosphorylated RRs (RR-P) to produce monophosphoimidazole (MPI) and unphosphorylated RR. Phosphotransfer from RR-P to imidazole required the intact RR active site, indicating that the RR provided the core catalytic machinery for Asp → His phosphotransfer. Imidazole functioned in an artificial phosphorelay to transfer phosphoryl groups between unrelated RRs. The X-ray crystal structure of an activated RR·imidazole complex showed imidazole oriented in the RR active site similarly to the His of an Hpt. Imidazole interacted with RR nonconserved active site residues, which influenced the relative reactivity of RR-P with imidazole versus water. Rate constants for reaction of imidazole or MPI with chimeric RRs suggested that the RR active site contributes to the kinetic preferences exhibited by the YPD1 Hpt.
 

 

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