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PDBsum entry 5cto
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protein ligands metals Protein-protein interface(s) links
Oxidoreductase PDB id
5cto

 

 

 

 

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Contents
Protein chains
367 a.a.
Ligands
NTD ×4
Metals
_FE ×4
Waters ×18
Obsolete entry
PDB id:
5cto
Name: Oxidoreductase
Title: Crystal structure of arabidopsis thaliana hppd complexed with ntbc
Structure: 4-hydroxyphenylpyruvate dioxygenase. Chain: a, b, c, d. Synonym: hppdase, 4-hydroxyphenylpyruvic acid oxidase. Engineered: yes
Source: Arabidopsis thaliana. Mouse-ear cress. Organism_taxid: 3702. Gene: hpd, pds1, at1g06570, f12k11.9. Expressed in: escherichia coli 'bl21-gold(de3)plyss ag'. Expression_system_taxid: 866768.
Resolution:
2.62Å     R-factor:   0.271     R-free:   0.306
Authors: W.C.Yang,G.F.Yang
Key ref: W.C.Yang and g.f.yang Structure of arabidopsis thaliana hppd complexed with. To be published, .
Date:
24-Jul-15     Release date:   26-Aug-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P93836  (HPPD_ARATH) -  4-hydroxyphenylpyruvate dioxygenase from Arabidopsis thaliana
Seq:
Struc: 		445 a.a.
367 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.13.11.27  - 4-hydroxyphenylpyruvate dioxygenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 3-(4-hydroxyphenyl)pyruvate + O2 = homogentisate + CO2
3-(4-hydroxyphenyl)pyruvate
Bound ligand (Het Group name = NTD)
matches with 44.00% similarity 		+ O2
 = homogentisate
 + CO2
      Cofactor: Fe cation
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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