spacer
spacer

PDBsum entry 4fgw

Go to PDB code: 
protein Protein-protein interface(s) links
Oxidoreductase PDB id
4fgw
Jmol
Contents
Protein chains
353 a.a.
Waters ×54
PDB id:
4fgw
Name: Oxidoreductase
Title: Structure of glycerol-3-phosphate dehydrogenase, gpd1, from sacharomyces cerevisiae
Structure: Glycerol-3-phosphate dehydrogenase [nad(+)] 1. Chain: a, b. Engineered: yes
Source: Saccharomyces cerevisiae. Baker's yeast. Organism_taxid: 559292. Strain: atcc 204508 / s288c. Gene: gpd1, dar1, hor1, osg1, ydl022w, d2830. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.45Å     R-factor:   0.200     R-free:   0.207
Authors: D.Aparicio,N.Munmun,X.Carpena,I.Fita,P.Loewen
Key ref: D.A.Alarcon et al. (2012). Structure of glycerol-3-phosphate dehydrogenase (GPD1) from Saccharomyces cerevisiae at 2.45 Å resolution. Acta Crystallogr Sect F Struct Biol Cryst Commun, 68, 1279-1283. PubMed id: 23143232 DOI: 10.1107/S1744309112037736
Date:
05-Jun-12     Release date:   07-Nov-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q00055  (GPD1_YEAST) -  Glycerol-3-phosphate dehydrogenase [NAD(+)] 1
Seq:
Struc:
391 a.a.
353 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.1.1.8  - Glycerol-3-phosphate dehydrogenase (NAD(+)).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH
sn-glycerol 3-phosphate
+ NAD(+)
= glycerone phosphate
+ NADH
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   5 terms 
  Biological process     response to stress   7 terms 
  Biochemical function     oxidoreductase activity     6 terms  

 

 
    reference    
 
 
DOI no: 10.1107/S1744309112037736 Acta Crystallogr Sect F Struct Biol Cryst Commun 68:1279-1283 (2012)
PubMed id: 23143232  
 
 
Structure of glycerol-3-phosphate dehydrogenase (GPD1) from Saccharomyces cerevisiae at 2.45 Å resolution.
D.A.Alarcon, M.Nandi, X.Carpena, I.Fita, P.C.Loewen.
 
  ABSTRACT  
 
No abstract given.