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PDBsum entry 4bsu

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protein ligands Protein-protein interface(s) links
Signaling protein PDB id
4bsu

 

 

 

 

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Contents
Protein chains
474 a.a.
103 a.a.
Ligands
NAG-NAG
NAG-NAG-BMA ×3
NAG ×2
PDB id:
4bsu
Name: Signaling protein
Title: Structure of the ectodomain of lgr5 in complex with r-spondin-1 (fu1fu2) in c2 crystal form
Structure: Leucine-rich repeat-containing g-protein coupled receptor 5. Chain: a, b, e, f. Synonym: g-protein coupled receptor 49, g-protein coupled receptor 67, g-protein coupled receptor hg38, lgr5 - leucine-rich repeat g- protein coupled receptor 5. Engineered: yes. Other_details: n-linked glycosylations at asn 63,77,208,500. R-spondin-1.
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek293. Expression_system_cell_line: hek293
Resolution:
3.20Å     R-factor:   0.243     R-free:   0.288
Authors: W.C.Peng,W.De Lau,F.Forneris,J.C.M.Granneman,M.Huch,H.Clevers,P.Gros
Key ref: W.C.Peng et al. (2013). Structure of stem cell growth factor R-spondin 1 in complex with the ectodomain of its receptor LGR5. Cell Rep, 3, 1885-1892. PubMed id: 23809763 DOI: 10.1016/j.celrep.2013.06.009
Date:
11-Jun-13     Release date:   26-Jun-13    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
O75473  (LGR5_HUMAN) -  Leucine-rich repeat-containing G-protein coupled receptor 5 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
907 a.a.
474 a.a.
Protein chains
Pfam   ArchSchema ?
Q2MKA7  (RSPO1_HUMAN) -  R-spondin-1 from Homo sapiens
Seq:
Struc:
263 a.a.
103 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
DOI no: 10.1016/j.celrep.2013.06.009 Cell Rep 3:1885-1892 (2013)
PubMed id: 23809763  
 
 
Structure of stem cell growth factor R-spondin 1 in complex with the ectodomain of its receptor LGR5.
W.C.Peng, W.de Lau, F.Forneris, J.C.Granneman, M.Huch, H.Clevers, P.Gros.
 
  ABSTRACT  
 
Leucine-rich repeat-containing G protein-coupled receptors 4-6 (LGR4-LGR6) are receptors for R-spondins, potent Wnt agonists that exert profound trophic effects on Wnt-driven stem cells compartments. We present crystal structures of a signaling-competent fragment of R-spondin 1 (Rspo1) at a resolution of 2.0 Å and its complex with the LGR5 ectodomain at a resolution of 3.2 Å. Ecto-LGR5 binds Rspo1 at its concave leucine-rich-repeat (LRR) surface, forming a dimeric 2:2 complex. Fully conserved residues on LGR4-LGR6 explain promiscuous binding of R-spondins. A phenylalanine clamp formed by Rspo1 Phe106 and Phe110 pinches Ala190 of LGR5 and is critical for binding. Mutations related to congenital anonychia reduce signaling, but not binding of Rspo1 to LGR5. Furthermore, antibody binding to the extended loop of the C-terminal LRR cap of LGR5 activates signaling in a ligand-independent manner. Thus, our data reveal binding of R-spondins to conserved sites on LGR4-LGR6 and, in analogy to FSHR and related receptors, suggest a direct signaling role for LGR4-LGR6 in addition to its formation of Wnt receptor and coreceptor complexes.
 

 

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