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PDBsum entry 3vjs

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Transcription PDB id
3vjs

 

 

 

 

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Contents
Protein chain
239 a.a.
Ligands
ASN-HIS-PRO-MET-
LEU-MET-ASN-LEU-
LEU-LYS
10S
Waters ×66
PDB id:
3vjs
Name: Transcription
Title: Vitamin d receptor complex with a carborane compound
Structure: Vitamin d3 receptor. Chain: a. Fragment: ligand-binding domain, unp residues 116-423. Synonym: vdr, 1,25-dihydroxyvitamin d3 receptor, nuclear receptor subfamily 1 group i member 1. Engineered: yes. Mutation: yes. Peptide from mediator of RNA polymerase ii transcription subunit 1.
Source: Rattus norvegicus. Rat. Organism_taxid: 10116. Gene: vdr, nr1i1. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Homo sapiens. Human.
Resolution:
1.93Å     R-factor:   0.232     R-free:   0.282
Authors: S.Fujii,M.Masuno,H.Kagechika,M.Nakabayashi,N.Ito
Key ref: S.Fujii et al. (2011). Boron cluster-based development of potent nonsecosteroidal vitamin D receptor ligands: direct observation of hydrophobic interaction between protein surface and carborane. J Am Chem Soc, 133, 20933-20941. PubMed id: 22066785
Date:
31-Oct-11     Release date:   08-Feb-12    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P13053  (VDR_RAT) -  Vitamin D3 receptor from Rattus norvegicus
Seq:
Struc:
423 a.a.
239 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
J Am Chem Soc 133:20933-20941 (2011)
PubMed id: 22066785  
 
 
Boron cluster-based development of potent nonsecosteroidal vitamin D receptor ligands: direct observation of hydrophobic interaction between protein surface and carborane.
S.Fujii, H.Masuno, Y.Taoda, A.Kano, A.Wongmayura, M.Nakabayashi, N.Ito, M.Shimizu, E.Kawachi, T.Hirano, Y.Endo, A.Tanatani, H.Kagechika.
 
  ABSTRACT  
 
No abstract given.

 

 

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