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PDBsum entry 3qvp

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protein ligands metals links
Oxidoreductase PDB id
3qvp
Jmol
Contents
Protein chain
581 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG ×3
FAD
GOL
PEG
Metals
_CL
Waters ×1296
PDB id:
3qvp
Name: Oxidoreductase
Title: Crystal structure of glucose oxidase for space group c2221 a resolution
Structure: Glucose oxidase. Chain: a. Synonym: beta-d-glucose:oxygen 1-oxido-reductase, glucose o god. Engineered: yes
Source: Aspergillus niger. Organism_taxid: 5061. Gene: gox
Resolution:
1.20Å     R-factor:   0.178     R-free:   0.188
Authors: P.Kommoju,Z.Chen,R.C.Bruckner,F.S.Mathews,M.S.Jorns
Key ref: P.R.Kommoju et al. (2011). Probing oxygen activation sites in two flavoprotein oxidases using chloride as an oxygen surrogate. Biochemistry, 50, 5521-5534. PubMed id: 21568312 DOI: 10.1021/bi200388g
Date:
25-Feb-11     Release date:   01-Jun-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P13006  (GOX_ASPNG) -  Glucose oxidase
Seq:
Struc:
 
Seq:
Struc:
605 a.a.
581 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.1.3.4  - Glucose oxidase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Beta-D-glucose + O2 = D-glucono-1,5-lactone + H2O2
Beta-D-glucose
Bound ligand (Het Group name = BMA)
matches with 91.67% similarity
+ O(2)
= D-glucono-1,5-lactone
+ H(2)O(2)
      Cofactor: FAD
FAD
Bound ligand (Het Group name = FAD) corresponds exactly
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     extracellular region   1 term 
  Biological process     oxidation-reduction process   2 terms 
  Biochemical function     oxidoreductase activity     5 terms  

 

 
    reference    
 
 
DOI no: 10.1021/bi200388g Biochemistry 50:5521-5534 (2011)
PubMed id: 21568312  
 
 
Probing oxygen activation sites in two flavoprotein oxidases using chloride as an oxygen surrogate.
P.R.Kommoju, Z.W.Chen, R.C.Bruckner, F.S.Mathews, M.S.Jorns.
 
  ABSTRACT  
 
No abstract given.