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PDBsum entry 3luf

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protein ligands metals Protein-protein interface(s) links
Signaling protein PDB id
3luf

 

 

 

 

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Contents
Protein chains
244 a.a. *
Ligands
DMS ×3
Metals
_MG ×4
Waters ×169
* Residue conservation analysis
PDB id:
3luf
Name: Signaling protein
Title: Structure of probable two-component system response regulator/ggdef domain protein
Structure: Two-component system response regulator/ggdef domain protein. Chain: a, b. Fragment: sequence database residues 2-249. Engineered: yes
Source: Aeromonas salmonicida. Organism_taxid: 382245. Strain: a449. Gene: asa_2441. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
1.76Å     R-factor:   0.189     R-free:   0.226
Authors: U.A.Ramagopal,R.Toro,S.K.Burley,S.C.Almo,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: U.A.Ramagopal et al. Structure of probable two-Component system response regulator/ggdef domain protein. To be published, .
Date:
17-Feb-10     Release date:   02-Mar-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
A4SNL2  (A4SNL2_AERS4) -  diguanylate cyclase from Aeromonas salmonicida (strain A449)
Seq:
Struc:
415 a.a.
244 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.7.65  - diguanylate cyclase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 GTP = 3',3'-c-di-GMP + 2 diphosphate
2 × GTP
= 3',3'-c-di-GMP
+ 2 × diphosphate
      Cofactor: Mg(2+); Mn(2+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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