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PDBsum entry 3lhl

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protein ligands metals links
Hydrolase PDB id
3lhl
Jmol
Contents
Protein chain
276 a.a. *
Ligands
PO4 ×2
MPD
Metals
_MN ×4
Waters ×166
* Residue conservation analysis
PDB id:
3lhl
Name: Hydrolase
Title: Crystal structure of a putative agmatinase from clostridium
Structure: Putative agmatinase. Chain: a. Fragment: sequence database residues 17-292. Engineered: yes
Source: Clostridium difficile. Organism_taxid: 272563. Strain: 630. Gene: cd0891, speb. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.30Å     R-factor:   0.193     R-free:   0.238
Authors: K.Palani,S.K.Burley,S.Swaminathan,New York Sgx Research Cent Structural Genomics (Nysgxrc)
Key ref: K.Palani et al. Crystal structure of a putative agmatinase from clostridium difficile. To be published, .
Date:
22-Jan-10     Release date:   23-Feb-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q18A84  (Q18A84_CLOD6) -  Agmatinase (Agmatine ureohydrolase) (AUH)
Seq:
Struc:
292 a.a.
276 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.5.3.11  - Agmatinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Agmatine + H2O = putrescine + urea
Agmatine
+ H(2)O
=
putrescine
Bound ligand (Het Group name = MPD)
matches with 40.00% similarity
+ urea
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     metabolic process   1 term 
  Biochemical function     hydrolase activity     4 terms