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PDBsum entry 3l9e

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protein metals Protein-protein interface(s) links
Oxidoreductase PDB id
3l9e
Jmol
Contents
Protein chains
154 a.a. *
Metals
_ZN ×4
Waters ×483
* Residue conservation analysis
PDB id:
3l9e
Name: Oxidoreductase
Title: Crystal structures of holo and cu-deficient cu/znsod from th bombyx mori and the implications in amyotrophic lateral scl
Structure: Superoxide dismutase [cu-zn]. Chain: a, b, c, d. Engineered: yes
Source: Bombyx mori. Silk moth. Organism_taxid: 7091. Strain: p50. Gene: sod1. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.05Å     R-factor:   0.203     R-free:   0.248
Authors: N.-N.Zhang,Y.-X.He,W.-F.Li,F.Zhao,L.-F.Yan,G.-Z.Zhang,Y.-B.T Y.Chen,C.-Z.Zhou
Key ref: N.N.Zhang et al. (2010). Crystal structures of holo and Cu-deficient Cu/Zn-SOD from the silkworm Bombyx mori and the implications in amyotrophic lateral sclerosis. Proteins, 78, 1999-2004. PubMed id: 20310068
Date:
05-Jan-10     Release date:   31-Mar-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P82205  (SODC_BOMMO) -  Superoxide dismutase [Cu-Zn]
Seq:
Struc:
154 a.a.
154 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.15.1.1  - Superoxide dismutase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 superoxide + 2 H+ = O2 + H2O2
2 × superoxide
+ 2 × H(+)
= O(2)
+ H(2)O(2)
      Cofactor: Fe cation or Mn(2+) or (Zn(2+) and Cu cation)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     oxidation-reduction process   3 terms 
  Biochemical function     antioxidant activity     4 terms  

 

 
    Added reference    
 
 
Proteins 78:1999-2004 (2010)
PubMed id: 20310068  
 
 
Crystal structures of holo and Cu-deficient Cu/Zn-SOD from the silkworm Bombyx mori and the implications in amyotrophic lateral sclerosis.
N.N.Zhang, Y.X.He, W.F.Li, Y.B.Teng, J.Yu, Y.Chen, C.Z.Zhou.
 
  ABSTRACT  
 
No abstract given.