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PDBsum entry 3izq

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protein Protein-protein interface(s) links
Ribosomal protein,hydrolase PDB id
3izq
Jmol
Contents
Protein chains
386 a.a.
516 a.a.
PDB id:
3izq
Name: Ribosomal protein,hydrolase
Title: Structure of the dom34-hbs1-gdpnp complex bound to a transla ribosome
Structure: Protein dom34. Chain: 0. Synonym: dom34p. Engineered: yes. Elongation factor 1 alpha-like protein. Chain: 1. Synonym: hbs1p. Engineered: yes
Source: Saccharomyces cerevisiae. Brewer's yeast,lager beer yeast,yeast. Organism_taxid: 4932. Gene: dom34, n2016, ynl001w. Expressed in: escherichia coli. Expression_system_taxid: 562. Yeast. Gene: hbs1, ykr084c, ykr404.
Authors: T.Becker,J.-P.Armache,A.Jarasch,A.M.Anger,E.Villa,H.Sieber,B Motaal,T.Mielke,O.Berninghausen,R.Beckmann
Key ref: T.Becker et al. (2011). Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome. Nat Struct Mol Biol, 18, 715-720. PubMed id: 21623367
Date:
30-Nov-10     Release date:   01-Jun-11    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P33309  (DOM34_YEAST) -  Protein DOM34
Seq:
Struc:
386 a.a.
386 a.a.
Protein chain
Pfam   ArchSchema ?
P32769  (HBS1_YEAST) -  Elongation factor 1 alpha-like protein
Seq:
Struc:
 
Seq:
Struc:
611 a.a.
516 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     nuclear-transcribed mRNA catabolic process, no-go decay   17 terms 
  Biochemical function     protein binding     11 terms  

 

 
Nat Struct Mol Biol 18:715-720 (2011)
PubMed id: 21623367  
 
 
Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.
T.Becker, J.P.Armache, A.Jarasch, A.M.Anger, E.Villa, H.Sieber, B.A.Motaal, T.Mielke, O.Berninghausen, R.Beckmann.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22664987 C.J.Shoemaker, and R.Green (2012).
Translation drives mRNA quality control.
  Nat Struct Mol Biol, 19, 594-601.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.