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PDBsum entry 3g25

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protein ligands metals Protein-protein interface(s) links
Transferase PDB id
3g25
Jmol
Contents
Protein chains
499 a.a. *
Ligands
GOL ×4
PO4 ×13
Metals
_NA ×7
Waters ×1215
* Residue conservation analysis
PDB id:
3g25
Name: Transferase
Title: 1.9 angstrom crystal structure of glycerol kinase (glpk) fro staphylococcus aureus in complex with glycerol.
Structure: Glycerol kinase. Chain: a, b, c, d. Synonym: atp:glycerol 3-phosphotransferase, glycerokinase, engineered: yes
Source: Staphylococcus aureus subsp. Aureus co organism_taxid: 93062. Strain: staphylococcus aureus subsp. Aureus col. Gene: glpk, sacol1320. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.90Å     R-factor:   0.195     R-free:   0.246
Authors: G.Minasov,T.Skarina,O.Onopriyenko,A.Savchenko,W.F.Anderson,C Structural Genomics Of Infectious Diseases (Csgid)
Key ref: G.Minasov et al. 1.9 angstrom crystal structure of glycerol kinase (glpk) from staphylococcus aureus in complex with glycerol.. To be published, .
Date:
30-Jan-09     Release date:   17-Feb-09    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q5HGD2  (GLPK_STAAC) -  Glycerol kinase
Seq:
Struc:
498 a.a.
499 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.1.30  - Glycerol kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + glycerol = ADP + sn-glycerol 3-phosphate
ATP
+
glycerol
Bound ligand (Het Group name = GOL)
corresponds exactly
= ADP
+ sn-glycerol 3-phosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     carbohydrate metabolic process   5 terms 
  Biochemical function     nucleotide binding     6 terms