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PDBsum entry 3do2

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protein ligands metals links
Hydrolase PDB id
3do2
Jmol
Contents
Protein chain
316 a.a. *
Ligands
VAL-LYS
Metals
_CA ×4
_ZN
Waters ×185
* Residue conservation analysis
PDB id:
3do2
Name: Hydrolase
Title: Thermolysin by lb nanotemplate method after high x-ray dose on esrf id14-2 beamline
Structure: Thermolysin. Chain: a. Synonym: thermostable neutral proteinase. Ec: 3.4.24.27
Source: Bacillus thermoproteolyticus. Organism_taxid: 1427
Resolution:
1.22Å     R-factor:   0.239     R-free:   0.261
Authors: E.Pechkova,S.K.Tripathi,C.Nicolini
Key ref: E.Pechkova et al. Radiation damage in protein structural characterization by synchrotron radiation: state of the art and nanotechnology-Based perspective. To be published, .
Date:
03-Jul-08     Release date:   07-Jul-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00800  (THER_BACTH) -  Thermolysin
Seq:
Struc:
 
Seq:
Struc:
548 a.a.
316 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.4.24.27  - Thermolysin.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Preferential cleavage: Xaa-|-Leu > Xaa-|-Phe.
      Cofactor: Ca(2+); Zn(2+)
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     proteolysis   1 term 
  Biochemical function     metalloendopeptidase activity     1 term