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PDBsum entry 3abz

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protein ligands Protein-protein interface(s) links
Hydrolase PDB id
3abz
Jmol
Contents
Protein chains
844 a.a. *
Ligands
GOL ×8
Waters ×3078
* Residue conservation analysis
PDB id:
3abz
Name: Hydrolase
Title: Crystal structure of se-met labeled beta-glucosidase from kluyveromyces marxianus
Structure: Beta-glucosidase i. Chain: a, b, c, d. Engineered: yes
Source: Kluyveromyces marxianus. Yeast. Organism_taxid: 4911. Strain: nbrc1777. Gene: bgl, bgli. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.15Å     R-factor:   0.163     R-free:   0.218
Authors: E.Yoshida,M.Hidaka,S.Fushinobu,T.Katayama,H.Kumagai
Key ref: E.Yoshida et al. (2010). Role of a PA14 domain in determining substrate specificity of a glycoside hydrolase family 3 β-glucosidase from Kluyveromyces marxianus. Biochem J, 431, 39-49. PubMed id: 20662765
Date:
25-Dec-09     Release date:   11-Aug-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
D1GCC6  (D1GCC6_KLUMA) -  Beta-glucosidase I
Seq:
Struc:
 
Seq:
Struc:
845 a.a.
844 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.2.1.21  - Beta-glucosidase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     metabolic process   2 terms 
  Biochemical function     hydrolase activity     4 terms  

 

 
Biochem J 431:39-49 (2010)
PubMed id: 20662765  
 
 
Role of a PA14 domain in determining substrate specificity of a glycoside hydrolase family 3 β-glucosidase from Kluyveromyces marxianus.
E.Yoshida, M.Hidaka, S.Fushinobu, T.Koyanagi, H.Minami, H.Tamaki, M.Kitaoka, T.Katayama, H.Kumagai.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21219452 D.Dodd, R.I.Mackie, and I.K.Cann (2011).
Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes.
  Mol Microbiol, 79, 292-304.  
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