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PDBsum entry 3ov6

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protein ligands links
Immune system PDB id
3ov6
Jmol
Contents
Protein chain
376 a.a. *
Ligands
NAG
D12
MK0
Waters ×38
* Residue conservation analysis
PDB id:
3ov6
Name: Immune system
Title: Cd1c in complex with mpm (mannosyl-beta1-phosphomycoketide)
Structure: Beta-2-microglobulin, t-cell surface glycoprotein cell surface glycoprotein cd1b. Chain: a. Fragment: beta-2-microglobulin. Synonym: beta-2-microglobulin form pi 5.3. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: trichoplusia ni. Expression_system_taxid: 7111.
Resolution:
2.50Å     R-factor:   0.242     R-free:   0.273
Authors: L.Scharf,N.S.Li,A.J.Hawk,D.Garzon,T.Zhang,A.R.Kazen,S.Shah, E.J.Haddadian,A.Saghatelian,J.D.Faraldo-Gomez,S.C.Meredith, J.A.Piccirilli,E.J.Adams
Date:
15-Sep-10     Release date:   19-Jan-11    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P29016  (CD1B_HUMAN) -  T-cell surface glycoprotein CD1b
Seq:
Struc:
333 a.a.
376 a.a.*
Protein chain
Pfam   ArchSchema ?
P29017  (CD1C_HUMAN) -  T-cell surface glycoprotein CD1c
Seq:
Struc:
333 a.a.
376 a.a.*
Protein chain
Pfam   ArchSchema ?
P61769  (B2MG_HUMAN) -  Beta-2-microglobulin
Seq:
Struc:
119 a.a.
376 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 141 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     extracellular region   15 terms 
  Biological process     immune system process   21 terms 
  Biochemical function     protein binding     2 terms