PDBsum entry: 3gdb

Hydrolase

PDB-id: 3gdb

Contents

Description

Header details

Header records

References

PROCHECK

Protein chain

634 a.a. *

Ligands

ACY ×2

PGE

Waters ×719

* Residue conservation analysis

Tools

Clefts Calculation

PDB id:

3gdb

Name:

Hydrolase

Title:

Crystal structure of spr0440 glycoside hydrolase domain, endo-d from streptococcus pneumoniae r6

Structure:

Putative uncharacterized protein spr0440. Chain: a. Fragment: glycoside hydrolase domain, residues 38-953. Synonym: endo-d. Engineered: yes

Source:

Streptococcus pneumoniae. Organism_taxid: 171101. Strain: r6. Gene: spr0440. Expressed in: escherichia coli. Expression_system_taxid: 562.

UniProt:

Q8CZ52 (Q8CZ52_STRR6)

Seq:

Struc:

Seq:

Struc:

Seq:

Struc:

Seq:

Struc:

Seq:

Struc:

Seq:

Struc:

Seq:

1659 a.a.

Struc:

634 a.a.

Key:	PfamA domain	PfamB domain
Secondary structure

Resolution:

1.87Å

R-factor:

0.164

R-free:

0.204

Authors:

Y.-L.Jiang,C.Frolet,A.-M.Di-Guilmi,C.-Z.Zhou,T.Vernet,Y.- X.Chen

Key ref:

y.-l.jiang et al. Crystal structure of Spr0440 glycoside hydrolase domain, Endo-D from Streptococcus pneumoniae R6. To be published, xsi:nil="true" />.

Date:

24-Feb-09

Release date:

17-Mar-09

Quick_links

Procheck

Clefts

Surface