PDBsum entry: 3gdb

Hydrolase

PDB id: 3gdb

Contents

Protein chain

634 a.a. *

Ligands

ACY ×2

PGE

Waters ×719

* Residue conservation analysis

PDB id:

3gdb

Name:

Hydrolase

Title:

Crystal structure of spr0440 glycoside hydrolase domain, endo-d from streptococcus pneumoniae r6

Structure:

Putative uncharacterized protein spr0440. Chain: a. Fragment: glycoside hydrolase domain, residues 38-953. Synonym: endo-d. Engineered: yes

Source:

Streptococcus pneumoniae. Organism_taxid: 171101. Strain: r6. Gene: spr0440. Expressed in: escherichia coli. Expression_system_taxid: 562.

Resolution:

1.87Å R-factor: 0.164 R-free: 0.204

Authors:

Y.-L.Jiang,C.Frolet,A.-M.Di-Guilmi,C.-Z.Zhou,T.Vernet,Y.- X.Chen

Key ref:

Y.-L.Jiang et al. Crystal structure of spr0440 glycoside hydrolase domain, Endo-D from streptococcus pneumoniae r6. To be published,

Date:

24-Feb-09 Release date: 17-Mar-09

Protein chain

Q8CZ52  (Q8CZ52_STRR6) -  Putative uncharacterized protein

Seq: 1659 a.a.

Struc: 634 a.a.

 Gene Ontology (GO) functional annotation 

• Cellular component: cytoplasm (1 term)
• Biochemical function: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (1 term)