spacer
spacer
Go to PDB code: 
protein ligands Protein-protein interface(s) links
Sugar binding protein, lyase PDB-id
3e80
    Jmol     Help!  
Contents
Description
Header details
Header records
References
PROCHECK
Protein chains
747 a.a. *
Ligands
RAM-MAN-GCU-XYS ×3
HS2 ×3
PO4 ×9
Metal ions
_ZN ×3
Waters ×536

* Residue conservation analysis
Tools
Image Generation
AstexViewer™@PDBe
Run PROCHECK
Clefts Calculation
  
PDB id: 3e80
Name: Sugar binding protein, lyase
Title: Structure of heparinase ii complexed with heparan sulfate degradation disaccharide product

Structure:
Heparinase ii protein. Chain: a, b, c. Fragment: unp residues 24-772

Source:
Pedobacter heparinus. Organism_taxid: 984

UniProt:
Chains A, B, C: Q46080 (Q46080_PEDHE)
Pfam  
Seq:
Struc:
Seq:
Struc:
Seq:
Struc:
Seq: 772 a.a.
Struc: 747 a.a.*
Key:    PfamA domain  PfamB domain
 Secondary structure
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

Resolution:
2.35Å

R-factor:
0.231

R-free:
0.267

Authors:
D.Shaya,M.Cygler

Key ref:
d.shaya and m.cygler Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product. TO BE PUBLISHED, xsi:nil="true" />.

Date:
19-Aug-08

Release date:
30-Dec-08

Related entries:
3e7j
'heparinaseii h202a/y257a double mutant
Quick_links
RCSB
PDBe
SRS
MMDB
JenaLib
OCA
Proteopedia
CATH
SCOP
FSSP
HSSP
PDBSWS
PQS
ProSAT
Whatcheck
Procheck
Go to PROCHECK summary
Surface
RasMol surface
spacer
spacer