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PDBsum entry 2ydn

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protein ligands metals Protein-protein interface(s) links
Oxidoreductase PDB id
2ydn
Jmol
Contents
Protein chains
316 a.a.
Ligands
BCN ×8
MPD
EDO ×3
Metals
_CA ×4
Waters ×843
Superseded by: 4b7u
PDB id:
2ydn
Name: Oxidoreductase
Title: Plasmodium falciparum l-lactate dehydrogenase complexed with
Structure: L-lactate dehydrogenase. Chain: a, b, c, d. Synonym: lactate dehydrogenase. Engineered: yes
Source: Plasmodium falciparum. Malaria parasite p. Falciparum. Organism_taxid: 5833. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.88Å     R-factor:   0.165     R-free:   0.189
Authors: R.W.Birkinshaw,R.L.Brady
Key ref: R.W.Birkinshaw and r.l.brady Crystal structure of pfldh complexed with bicine. To be published, .
Date:
22-Mar-11     Release date:   30-Mar-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q71T02  (Q71T02_PLAFA) -  L-lactate dehydrogenase
Seq:
Struc:
316 a.a.
316 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.1.1.27  - L-lactate dehydrogenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: (S)-lactate + NAD+ = pyruvate + NADH
(S)-lactate
Bound ligand (Het Group name = MPD)
matches with 40.00% similarity
+ NAD(+)
= pyruvate
+ NADH
Molecule diagrams generated from .mol files obtained from the KEGG ftp site