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PDBsum entry 2ybv

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protein metals Protein-protein interface(s) links
Lyase PDB id
2ybv
Jmol
Contents
Protein chains
(+ 2 more) 428 a.a.
(+ 2 more) 104 a.a.
Metals
_CL ×15
Waters ×832
PDB id:
2ybv
Name: Lyase
Title: Structure of rubisco from thermosynechococcus elongatus
Structure: Ribulose bisphosphate carboxylase large chain. Chain: a, c, e, g, i, k, m, o. Engineered: yes. Ribulose bisphosphate carboxylase small subunit. Chain: b, d, f, h, j, l, n, p. Engineered: yes
Source: Thermosynechococcus elongatus. Organism_taxid: 197221. Strain: bp-1. Expressed in: escherichia coli. Expression_system_taxid: 668369.
Resolution:
2.30Å     R-factor:   0.197     R-free:   0.231
Authors: B.Terlecka,V.Wilhelmi,W.Bialek,B.Gubernator,A.Szczepaniak,E.
Key ref: B.Terlecka et al. Structure of ribulose-1,5-Bisphosphate carboxylase oxygenase from thermosynechococcus elongatus. To be published, .
Date:
10-Mar-11     Release date:   28-Mar-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8DIS5  (RBL_THEEB) -  Ribulose bisphosphate carboxylase large chain
Seq:
Struc:
475 a.a.
428 a.a.
Protein chains
Pfam   ArchSchema ?
Q8DIS7  (Q8DIS7_THEEB) -  Ribulose bisphosphate carboxylase small subunit
Seq:
Struc:
118 a.a.
104 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains A, C, E, G, I, K, M, O: E.C.4.1.1.39  - Ribulose-bisphosphate carboxylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O
2 × 3-phospho-D-glycerate
+ 2 × H(+)
= D-ribulose 1,5-bisphosphate
+ CO(2)
+ H(2)O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     oxidation-reduction process   5 terms 
  Biochemical function     oxidoreductase activity     6 terms