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PDBsum entry 2qf8

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protein ligands links
Signaling protein PDB id
2qf8
Jmol
Contents
Protein chain
361 a.a. *
Ligands
NAG
NAG-NAG-NAG-NAG
Waters ×144
* Residue conservation analysis
PDB id:
2qf8
Name: Signaling protein
Title: Crystal structure of the complex of buffalo secretory glycop with tetrasaccharide at 2.8a resolution
Structure: Chitinase-3-like protein 1. Chain: a. Synonym: mammary gland protein 40, spb-40
Source: Bubalus bubalis. Water buffalo. Organism_taxid: 89462. Secretion: milk
Resolution:
2.80Å     R-factor:   0.189     R-free:   0.227
Authors: A.K.Singh,R.Jain,M.Sinha,A.Kumar,N.Singh,S.Sharma,P.Kaur,T.P
Key ref: A.K.Singh et al. Crystal structure of the complex of buffalo secretory glycoprotein with tetrasaccharide at 2.8a resolution. To be published, .
Date:
27-Jun-07     Release date:   10-Jul-07    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q7YS85  (CH3L1_BUBBU) -  Chitinase-3-like protein 1
Seq:
Struc:
383 a.a.
361 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 11 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     extracellular region   5 terms 
  Biological process     cellular response to tumor necrosis factor   16 terms 
  Biochemical function     carbohydrate binding     4 terms