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PDBsum entry 2pvq

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protein ligands links
Transferase PDB id
2pvq
Jmol
Contents
Protein chain
201 a.a. *
Ligands
SO4 ×2
GSH
Waters ×215
* Residue conservation analysis
PDB id:
2pvq
Name: Transferase
Title: Crystal structure of ochrobactrum anthropi glutathione trans cys10ala mutant with glutathione bound at the h-site
Structure: Glutathione s-transferase. Chain: a. Engineered: yes. Mutation: yes
Source: Ochrobactrum anthropi. Organism_taxid: 529. Gene: gst. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.80Å     R-factor:   0.200     R-free:   0.248
Authors: N.Allocati,L.Federici,M.Masulli,B.Favaloro,C.Di Ilio
Key ref:
N.Allocati et al. (2008). Cysteine 10 is critical for the activity of Ochrobactrum anthropi glutathione transferase and its mutation to alanine causes the preferential binding of glutathione to the H-site. Proteins, 71, 16-23. PubMed id: 18076047 DOI: 10.1002/prot.21835
Date:
10-May-07     Release date:   15-Jan-08    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P81065  (GST_OCHAN) -  Glutathione S-transferase
Seq:
Struc:
201 a.a.
201 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.5.1.18  - Glutathione transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: RX + glutathione = HX + R-S-glutathione
RX
+
glutathione
Bound ligand (Het Group name = GSH)
corresponds exactly
= HX
+ R-S-glutathione
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     metabolic process   1 term 
  Biochemical function     transferase activity     2 terms  

 

 
    reference    
 
 
DOI no: 10.1002/prot.21835 Proteins 71:16-23 (2008)
PubMed id: 18076047  
 
 
Cysteine 10 is critical for the activity of Ochrobactrum anthropi glutathione transferase and its mutation to alanine causes the preferential binding of glutathione to the H-site.
N.Allocati, L.Federici, M.Masulli, B.Favaloro, C.Di Ilio.
 
  ABSTRACT  
 
The role of the evolutionarily conserved residue Cys10 in Ochrobactrum anthropi glutathione transferase (OaGST) has been examined by replacing it with an alanine. A double mutant C10A/S11A was also prepared. The effect of the replacements on the coniugating and thiotransferase activities, and on the thermal and chemical stability of the enzyme was analyzed. Our data support the view that in OaGST, in contrast with other beta class GSTs that display significant differences in the glutathione-binding site, Cys10 is a key residue for glutathione coniugating activity. Furthermore, analysis of the OaGST-Cys10Ala structure, crystallized in the presence of glutathione, reveals that this mutation causes a switch between the high-affinity G-site and a low-affinity H-site where hydrophobic cosubstrates bind and where we observe the presence of an unexpected glutathione.
 
  Selected figure(s)  
 
Figure 2.
Figure 2. Effect of temperature on the stability of wild-type and mutant OaGST enzymes. The enzyme activity at 25°C was taken as 100%. Wild-type ( ), C10A ( ), C10A/S11A ( ).
Figure 4.
Figure 4. Crystal structure of OaGST-Cys10Ala. A: Close-up view of the H-site with relevant residues and GSH (green carbons) shown in sticks. The 2Fo-Fc map, contoured at 0.9 , is shown in cyan. The GSH-omit Fo-Fc map is shown in orange (contoured at 2.5 ) and magenta (contoured at 2.0 ). B: Superposition of OaGST and BxGST. The surface of OaGST-Cys10Ala is shown in grey. In BxGST both the G-site and the H-site are occupied by GSH molecules (shown in blue). The H-site GSH of OaGST-Cys10Ala is shown in red and it is slightly shifted toward the G-site with respect to the BxGST corresponding one.
 
  The above figures are reprinted by permission from John Wiley & Sons, Inc.: Proteins (2008, 71, 16-23) copyright 2008.  
  Figures were selected by the author.  

Literature references that cite this PDB file's key reference

  PubMed id Reference
  21425927 S.M.Belchik, and L.Xun (2011).
S-glutathionyl-(chloro)hydroquinone reductases: a new class of glutathione transferases functioning as oxidoreductases.
  Drug Metab Rev, 43, 307-316.  
20663851 L.Federici, M.Masulli, C.Di Ilio, and N.Allocati (2010).
Characterization of the hydrophobic substrate-binding site of the bacterial beta class glutathione transferase from Proteus mirabilis.
  Protein Eng Des Sel, 23, 743-750.  
19016852 N.Allocati, L.Federici, M.Masulli, and C.Di Ilio (2009).
Glutathione transferases in bacteria.
  FEBS J, 276, 58-75.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.