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PDBsum entry 2kyu

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protein metals links
Transferase PDB id
2kyu

 

 

 

 

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Contents
Protein chain
67 a.a. *
Metals
_ZN ×2
* Residue conservation analysis
PDB id:
2kyu
Name: Transferase
Title: The solution structure of the phd3 finger of mll
Structure: Histone-lysine n-methyltransferase mll. Chain: a. Fragment: phd3 finger (unp residues 1564-1628). Synonym: zinc finger protein hrx, all-1, trithorax-like protein, lysine n-methyltransferase 2a, kmt2a, cxxc-type zinc finger protein 7. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: mll, all1, cxxc7, hrx, htrx, kmt2a, mll1, trx1. Expressed in: escherichia coli. Expression_system_taxid: 562.
NMR struc: 10 models
Authors: S.Park,J.H.Bushweller
Key ref: S.Park et al. (2010). The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression . Biochemistry, 49, 6576-6586. PubMed id: 20677832
Date:
08-Jun-10     Release date:   25-Aug-10    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q03164  (KMT2A_HUMAN) -  Histone-lysine N-methyltransferase 2A from Homo sapiens
Seq:
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Seq:
Struc:
3969 a.a.
67 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class 1: E.C.2.1.1.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
   Enzyme class 2: E.C.2.1.1.364  - [histone H3]-lysine(4) N-methyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-lysyl4-[histone H3] + S-adenosyl-L-methionine = N6-methyl-L- lysyl4-[histone H3] + S-adenosyl-L-homocysteine + H+
L-lysyl(4)-[histone H3]
+ S-adenosyl-L-methionine
= N(6)-methyl-L- lysyl(4)-[histone H3]
+ S-adenosyl-L-homocysteine
+ H(+)
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Biochemistry 49:6576-6586 (2010)
PubMed id: 20677832  
 
 
The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression .
S.Park, U.Osmers, G.Raman, R.H.Schwantes, M.O.Diaz, J.H.Bushweller.
 
  ABSTRACT  
 
No abstract given.

 

 

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