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PDBsum entry 2kui

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protein links
Transferase PDB id
2kui

 

 

 

 

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Contents
Protein chain
272 a.a. *
* Residue conservation analysis
PDB id:
2kui
Name: Transferase
Title: Nmr structure of the pasta domain of mycobacterium tuberculosis of pknb
Structure: Serine/threonine-protein kinase pknb. Chain: a. Fragment: pasta domains 1,2,3 and 4, residues 355-626. Synonym: pknb. Engineered: yes
Source: Mycobacterium tuberculosis. Organism_taxid: 83332. Strain: h37rv. Gene: rv0014c. Expressed in: escherichia coli. Expression_system_taxid: 469008.
NMR struc: 28 models
Authors: P.Barthe,G.Mukamolova,C.Roumestand,M.Cohen-Gonsaud
Key ref: P.Barthe et al. (2010). The structure of PknB extracellular PASTA domain from mycobacterium tuberculosis suggests a ligand-dependent kinase activation. Structure, 18, 606-615. PubMed id: 20462494
Date:
17-Feb-10     Release date:   14-Apr-10    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P9WI81  (PKNB_MYCTU) -  Serine/threonine-protein kinase PknB from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Seq:
Struc:
 
Seq:
Struc:
626 a.a.
272 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
Structure 18:606-615 (2010)
PubMed id: 20462494  
 
 
The structure of PknB extracellular PASTA domain from mycobacterium tuberculosis suggests a ligand-dependent kinase activation.
P.Barthe, G.V.Mukamolova, C.Roumestand, M.Cohen-Gonsaud.
 
  ABSTRACT  
 
PknB is a transmembrane Ser/Thr protein kinase that defines and belongs to an ultraconserved kinase subfamily found in Gram-positive bacteria. Essential for Mycobacterium tuberculosis growth, its close homolog in Bacillus subtilis has been linked to exit from dormancy. The kinase possesses an extracellular region composed of a repetition of PASTA domains, believed to bind peptidoglycan fragments that might act as a signaling molecule. We report here the first solution structure of this extracellular region. Small-angle X-ray scattering and nuclear magnetic resonance studies show that the four PASTA domains display an unexpected linear organization, contrary to what is observed in the distant protein PBP2x from Streptococccus pneumoniae where two PASTA domains fold over in a compact structure. We propose a model for PknB activation based on a ligand-dependent dimerization of the extracellular PASTA domains that initiates multiple signaling pathways.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21208192 A.Ruggiero, F.Squeglia, D.Marasco, R.Marchetti, A.Molinaro, and R.Berisio (2011).
X-ray structural studies of the entire extracellular region of the serine/threonine kinase PrkC from Staphylococcus aureus.
  Biochem J, 435, 33-41.
PDB code: 3py9
21342471 G.Jones, R.Del Sol, E.Dudley, and P.Dyson (2011).
Forkhead-associated proteins genetically linked to the serine/threonine kinase PknB regulate carbon flux towards antibiotic biosynthesis in Streptomyces coelicolor.
  Microb Biotechnol, 4, 263-274.  
21134645 T.N.Lombana, N.Echols, M.C.Good, N.D.Thomsen, H.L.Ng, A.E.Greenstein, A.M.Falick, D.S.King, and T.Alber (2010).
Allosteric activation mechanism of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknB.
  Structure, 18, 1667-1677.  
21143326 V.Molle, G.Gulten, C.Vilchèze, R.Veyron-Churlet, I.Zanella-Cléon, J.C.Sacchettini, W.R.Jacobs, and L.Kremer (2010).
Phosphorylation of InhA inhibits mycolic acid biosynthesis and growth of Mycobacterium tuberculosis.
  Mol Microbiol, 78, 1591-1605.
PDB codes: 3oew 3oey 3of2
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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