PDBsum entry 2kmc

Cell adhesion

PDB id: 2kmc

Contents

Protein chain

102 a.a. *

* Residue conservation analysis

PDB id:

2kmc

Name:

Cell adhesion

Title:

Solution structure of the n-terminal domain of kindlin-1

Structure:

Fermitin family homolog 1. Chain: a. Fragment: residues 1-96. Synonym: kindlin-1, unc-112-related protein 1. Engineered: yes

Source:

Mus musculus. Mouse. Organism_taxid: 10090. Gene: fermt1, kind1, urp1. Expressed in: escherichia coli. Expression_system_taxid: 562.

NMR struc:

20 models

Authors:

B.T.Goult,N.Bate,G.C.Roberts,I.L.Barsukov,D.R.Critchley

Key ref:

B.T.Goult et al. (2009). The structure of the N-terminus of kindlin-1: a domain important for alphaiibbeta3 integrin activation. J Mol Biol, 394, 944-956. PubMed id: 19804783 DOI: 10.1016/j.jmb.2009.09.061

Date:

27-Jul-09 Release date: 06-Oct-09

Protein chain

P59113  (FERM1_MOUSE) -  Fermitin family homolog 1 from Mus musculus

Seq: 677 a.a.

Struc: 102 a.a.

Enzyme reactions

• Enzyme class: E.C.?

DOI no: 10.1016/j.jmb.2009.09.061

J Mol Biol 394:944-956 (2009)

PubMed id: 19804783

The structure of the N-terminus of kindlin-1: a domain important for alphaiibbeta3 integrin activation.

B.T.Goult, M.Bouaouina, D.S.Harburger, N.Bate, B.Patel, N.J.Anthis, I.D.Campbell, D.A.Calderwood, I.L.Barsukov, G.C.Roberts, D.R.Critchley.

ABSTRACT

The integrin family of heterodimeric cell adhesion molecules exists in both low- and high-affinity states, and integrin activation requires binding of the talin FERM (four-point-one, ezrin, radixin, moesin) domain to membrane-proximal sequences in the beta-integrin cytoplasmic domain. However, it has recently become apparent that the kindlin family of FERM domain proteins is also essential for talin-induced integrin activation. FERM domains are typically composed of F1, F2, and F3 domains, but the talin FERM domain is atypical in that it contains a large insert in F1 and is preceded by a previously unrecognized domain, F0. Initial sequence alignments showed that the kindlin FERM domain was most similar to the talin FERM domain, but the homology appeared to be restricted to the F2 and F3 domains. Based on a detailed characterization of the talin FERM domain, we have reinvestigated the sequence relationship with kindlins and now show that kindlins do indeed contain the same domain structure as the talin FERM domain. However, the kindlin F1 domain contains an even larger insert than that in talin F1 that disrupts the sequence alignment. The insert, which varies in length between different kindlins, is not conserved and, as in talin, is largely unstructured. We have determined the structure of the kindlin-1 F0 domain by NMR, which shows that it adopts the same ubiquitin-like fold as the talin F0 and F1 domains. Comparison of the kindlin-1 and talin F0 domains identifies the probable interface with the kindlin-1 F1 domain. Potential sites of interaction of kindlin F0 with other proteins are discussed, including sites that differ between kindlin-1, kindlin-2, and kindlin-3. We also demonstrate that F0 is required for the ability of kindlin-1 to support talin-induced alphaIIbbeta3 integrin activation and for the localization of kindlin-1 to focal adhesions.

Selected figure(s)

Figure 1.
Fig. 1. Comparison of the domain structure of kindlins and the talin head. (a) Schematic diagram of the domain structure of kindlins and talin. The individual domains—F1, F2, and F3—that make up a canonical FERM domain are shown in green, orange, and blue, respectively; the F0 domain is shown in red. The kindlin PH domain is indicated by a black box. Unstructured regions including the F1–loop region are shown in white. The position of the long C-terminal talin rod is indicated. The horizontal scale in both schematics is the same. (b) The primary sequences of mouse kindlin-1 and talin-1 FERM domains were aligned by T-Coffee. The same color scheme is used as in (a). The sequence of the F1 insert and the kindlin PH domain are not included in the alignment. The six tryptophan residues in kindlin-1 F0 are shown in bold. The overall similarity between talin-1 and kindlin-1 is relatively low (28%), due largely to the inclusion of the kindlin PH domain and the insert in F1. The similarity between the individual F0, F1, F2, and F3 domains is much higher (36–55%).

Figure 5.
Fig. 5. The kindlin-1 F0 domain is required for targeting to FAs. Images of CHO cells stably expressing αIIbβ3 integrin transiently transfected with GFP-tagged kindlin-1 wild-type, F0, and ΔF0 expression constructs after 4 h growth on fibrinogen-coated coverslips. GFP-kindlin-1 co-localizes with endogenous vinculin at FAs (white arrows). Neither GFP-kindlin-1 F0 nor GFP-kindlin-1ΔF0 clusters in vinculin-rich FAs.

The above figures are reprinted by permission from Elsevier: J Mol Biol (2009, 394, 944-956) copyright 2009.

Figures were selected by an automated process.