spacer
spacer
Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Blood clotting PDB id
2hlo
Jmol
Contents
Protein chains
67 a.a. *
303 a.a. *
292 a.a. *
54 a.a. *
Ligands
GLY-HYP-ARG-PRO-
NH2 ×2
NAG-NAG
NAG-NDG
Metals
_CA ×7
Waters ×202
* Residue conservation analysis
PDB id:
2hlo
Name: Blood clotting
Title: Crystal structure of fragment d-dimer from human fibrin comp gly-hydroxypro-arg-pro-amide
Structure: Fibrin alpha chain. Chain: a, d. Fibrin beta chain. Chain: b, e. Fibrin, gamma polypeptide. Chain: c, f. Gly-hyp-arg-pro-amide peptide ligand. Chain: g, h. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Synthetic: yes. Other_details: the peptide was chemically synthesized.
Resolution:
2.60Å     R-factor:   0.210     R-free:   0.268
Authors: R.F.Doolittle,J.M.Kollman,A.Chen,L.Pandi
Date:
08-Jul-06     Release date:   17-Jul-07    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P02671  (FIBA_HUMAN) -  Fibrinogen alpha chain
Seq:
Struc: 		 
Seq:
Struc: 		866 a.a.
67 a.a.
Protein chains
Pfam   ArchSchema ?
P02675  (FIBB_HUMAN) -  Fibrinogen beta chain
Seq:
Struc: 		491 a.a.
303 a.a.
Protein chains
Pfam   ArchSchema ?
P02679  (FIBG_HUMAN) -  Fibrinogen gamma chain
Seq:
Struc: 		453 a.a.
292 a.a.
Protein chain
Pfam   ArchSchema ?
P02671  (FIBA_HUMAN) -  Fibrinogen alpha chain
Seq:
Struc: 		 
Seq:
Struc: 		866 a.a.
54 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     extracellular space   2 terms 
  Biological process     signal transduction   3 terms 
  Biochemical function     receptor binding     2 terms