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PDBsum entry 2gcd

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protein ligands Protein-protein interface(s) links
Transferase PDB id
2gcd

 

 

 

 

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Contents
Protein chains
309 a.a. *
Ligands
STU ×2
Waters ×277
* Residue conservation analysis
PDB id:
2gcd
Name: Transferase
Title: Tao2 kinase domain-staurosporine structure
Structure: Serine/threonine-protein kinase tao2. Chain: a, b. Synonym: thousand and one amino acid protein 2. Engineered: yes
Source: Rattus norvegicus. Norway rat. Organism_taxid: 10116. Gene: tao2. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108
Resolution:
2.55Å     R-factor:   0.203     R-free:   0.261
Authors: T.Zhou,L.Sun,Y.Gao,S.Earnest,M.H.Cobb,E.J.Goldsmith
Key ref: T.J.Zhou et al. (2006). Crystal structure of the MAP3K TAO2 kinase domain bound by an inhibitor staurosporine. Acta Biochim Biophys Sin (shanghai), 38, 385-392. PubMed id: 16761096
Date:
14-Mar-06     Release date:   05-Sep-06    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9JLS3  (TAOK2_RAT) -  Serine/threonine-protein kinase TAO2 from Rattus norvegicus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1235 a.a.
309 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
Acta Biochim Biophys Sin (shanghai) 38:385-392 (2006)
PubMed id: 16761096  
 
 
Crystal structure of the MAP3K TAO2 kinase domain bound by an inhibitor staurosporine.
T.J.Zhou, L.G.Sun, Y.Gao, E.J.Goldsmith.
 
  ABSTRACT  
 
Mitogen-activated protein kinase (MAPK) signal transduction pathways are ubiquitous in eukaryotic cells, which transfer signals from the cell surface to the nucleus, controlling multiple cellular programs. MAPKs are activated by MAPK kinases [MAP2Ks or MAP/extracellular signal-regulated kinase (ERK) kinases (MEK)], which in turn are activated by MAPK kinase kinases (MAP3Ks). TAO2 is a MAP3K level kinase that activates the MAP2Ks MEK3 and MEK6 to activate p38 MAPKs. Because p38 MAPKs are key regulators of expression of inflammatory cytokines, they appear to be involved in human diseases such as asthma and autoimmunity. As an upstream activator of p38s, TAO2 represents a potential drug target. Here we report the crystal structure of active TAO2 kinase domain in complex with staurosporine, a broad-range protein kinase inhibitor that inhibits TAO2 with an IC50 of 3 mM. The structure reveals that staurosporine occupies the position where the adenosine of ATP binds in TAO2, and the binding of the inhibitor mimics many features of ATP binding. Both polar and nonpolar interactions contribute to the enzyme-inhibitor recognition. Staurosporine induces conformational changes in TAO2 residues that surround the inhibitor molecule, but causes very limited global changes in the kinase. The structure provides atomic details for TAO2-staurosporine interactions, and explains the relatively low potency of staurosporine against TAO2. The structure presented here should aid in the design of inhibitors specific to TAO2 and related kinases.
 

 

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