PDBsum entry: 2ebi

DNA binding protein

PDB id: 2ebi

Contents

Protein chain

86 a.a. *

* Residue conservation analysis

PDB id:

2ebi

Name:

DNA binding protein

Title:

Arabidopsis gt-1 DNA-binding domain with t133d phosphomimeti

Structure:

DNA binding protein gt-1. Chain: a. Fragment: DNA-binding domain, residues 81-166. Synonym: hypothetical protein at1g13450. Engineered: yes. Mutation: yes

Source:

Arabidopsis thaliana. Thale cress. Organism_taxid: 3702. Gene: t6j4.18. Expressed in: escherichia coli. Expression_system_taxid: 562.

NMR struc:

20 models

Authors:

T.Nagata,K.Noto,E.Niyada,Y.Ikeda,Y.Yamamoto,S.Uesugi,J.Murat K.Hiratsuka,M.Katahira

Key ref:

T.Nagata et al. (2010). Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: mechanism for an increase in DNA-binding affinity through phosphorylation. Proteins, 78, 3033-3047. PubMed id: 20717979 DOI: 10.1002/prot.22827

Date:

08-Feb-07 Release date: 19-Feb-08

Protein chain

Q9FX53  (TGT1_ARATH) -  Trihelix transcription factor GT-1

Seq: 406 a.a.

Struc: 86 a.a.*

* PDB and UniProt seqs differ at 1 residue position (black cross)

 Gene Ontology (GO) functional annotation 

• Biological process: regulation of transcription (1 term)
• Biochemical function: DNA binding (1 term)

DOI no: 10.1002/prot.22827

Proteins 78:3033-3047 (2010)

PubMed id: 20717979

Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: mechanism for an increase in DNA-binding affinity through phosphorylation.

T.Nagata, E.Niyada, N.Fujimoto, Y.Nagasaki, K.Noto, Y.Miyanoiri, J.Murata, K.Hiratsuka, M.Katahira.

ABSTRACT

No abstract given.