PDBsum entry: 2e6r

DNA binding protein

PDB id: 2e6r

Contents

Protein chain

92 a.a. *

Metals

_ZN ×2

* Residue conservation analysis

PDB id:

2e6r

Name:

DNA binding protein

Title:

Solution structure of the phd domain in smcy protein

Structure:

Jumonji/arid domain-containing protein 1d. Chain: a. Fragment: phd domain. Synonym: protein smcy, histocompatibility y antigen, h-y. Engineered: yes

Source:

Homo sapiens. Human. Organism_taxid: 9606. Gene: jarid1d, hy, hya, kiaa0234, smcy. Other_details: cell free protein synthesis

NMR struc:

20 models

Authors:

S.Kadirvel,F.He,Y.Muto,M.Inoue,T.Kigawa,M.Shirouzu,T.Terada, S.Yokoyama,Riken Structural Genomics/proteomics Initiative (Rsgi)

Key ref:

S.Kadirvel et al. Solution structure of the phd domain in smcy protein. To be published,

Date:

28-Dec-06 Release date: 03-Jul-07

Protein chain

Q9BY66  (KDM5D_HUMAN) -  Lysine-specific demethylase 5D

Seq: 1539 a.a.

Struc: 92 a.a.*

* PDB and UniProt seqs differ at 13 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 

• Biochemical function: protein binding (2 terms)