PDBsum entry: 2dnt

Structural protein

PDB id: 2dnt

Contents

Protein chain

78 a.a. *

* Residue conservation analysis

PDB id:

2dnt

Name:

Structural protein

Title:

Solution structure of rsgi ruh-064, a chromo domain from human cdna

Structure:

Chromodomain protein, y chromosome-like, isoform b. Chain: a. Fragment: methylated histone h3 tail binding domain. Engineered: yes

Source:

Homo sapiens. Human. Organism_taxid: 9606. Expressed in: cell free synthesis. Other_details: cell-free protein synthesis

NMR struc:

20 models

Authors:

A.Z.M.Ruhul Momen,H.Hirota,K.Izumi,M.Yoshida,S.Yokoyama, Riken Structural Genomics/proteomics Initiative (Rsgi)

Key ref:

A.Z.M.Ruhul momen et al. Solution structure of rsgi ruh-064, A chromo domain from human cdna. To be published,

Date:

26-Apr-06 Release date: 26-Oct-06

Protein chain

Q9Y232  (CDYL1_HUMAN) -  Chromodomain Y-like protein

Seq: 598 a.a.

Struc: 78 a.a.*

* PDB and UniProt seqs differ at 16 residue positions (black crosses)

Enzyme reactions

• Enzyme class: E.C.2.3.1.48 - Histone acetyltransferase.
• Reaction: Acetyl-CoA + [histone] = CoA + acetyl-[histone]

Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 Gene Ontology (GO) functional annotation 

• Cellular component: nucleus (2 terms)
• Biological process: chromatin assembly or disassembly (1 term)
• Biochemical function: chromatin binding (1 term)