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PDBsum entry 1vrg

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protein ligands metals Protein-protein interface(s) links
Ligase PDB id
1vrg
Jmol
Contents
Protein chains
(+ 0 more) 515 a.a. *
Ligands
BCT ×10
Metals
_MG ×3
Waters ×1439
* Residue conservation analysis
PDB id:
1vrg
Name: Ligase
Title: Crystal structure of propionyl-coa carboxylase, beta subunit from thermotoga maritima at 2.30 a resolution
Structure: Propionyl-coa carboxylase, beta subunit. Chain: a, b, c, d, e, f. Engineered: yes
Source: Thermotoga maritima. Organism_taxid: 243274. Strain: msb8. Gene: tm0716. Expressed in: escherichia coli. Expression_system_taxid: 562.
Biol. unit: Hexamer (from PQS)
Resolution:
2.30Å     R-factor:   0.157     R-free:   0.210
Authors: Joint Center For Structural Genomics (Jcsg)
Key ref: Joint center for structural genomics (jcsg) Crystal structure of propionyl-Coa carboxylase, Beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution. To be published, .
Date:
22-Feb-05     Release date:   08-Mar-05    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9WZH5  (Q9WZH5_THEMA) -  Acetyl-coenzyme A carboxyl transferase alpha chain / Acetyl-coenzyme A carboxyl transferase beta chain Propionyl-CoA carboxylase beta chain
Seq:
Struc:
515 a.a.
515 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class 1: E.C.6.4.1.2  - Acetyl-CoA carboxylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA
ATP
+ acetyl-CoA
+ HCO(3)(-)
= ADP
+ phosphate
+ malonyl-CoA
      Cofactor: Biotin
Biotin
   Enzyme class 2: E.C.6.4.1.3  - Propionyl-CoA carboxylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl- CoA
ATP
+ propanoyl-CoA
+ HCO(3)(-)
= ADP
+ phosphate
+ (S)-methylmalonyl- CoA
      Cofactor: Biotin
Biotin
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     metabolic process   1 term 
  Biochemical function     transferase activity     4 terms