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Structural genomics, unknown function PDB id
1vdy
Jmol
Contents
Protein chain
140 a.a. *
* Residue conservation analysis
PDB id:
1vdy
Name: Structural genomics, unknown function
Title: Nmr structure of the hypothetical enth-vhs domain at3g16270 from arabidopsis thaliana
Structure: Hypothetical protein (rafl09-17-b18). Chain: a. Fragment: enth-vhs hypothetical domain. Engineered: yes
Source: Arabidopsis thaliana. Thale cress. Organism_taxid: 3702. Gene: riken cdna rafl09-17-b18. Other_details: e.Coli cell-free protein synthesis
NMR struc: 20 models
Authors: B.Lopez-Mendez,D.Pantoja-Uceda,T.Tomizawa,S.Koshiba, T.Kigawa,M.Shirouzu,T.Terada,M.Inoue,T.Yabuki,M.Aoki,E.Seki T.Matsuda,H.Hirota,M.Yoshida,A.Tanaka,T.Osanai,M.Seki, K.Shinozaki,S.Yokoyama,P.Guntert,Riken Structural Genomics/proteomics Initiative (Rsgi)
Key ref: B.López-Méndez et al. (2004). NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana. J Biomol NMR, 29, 205-206. PubMed id: 15014234 DOI: 10.1023/B:JNMR.0000019239.44783.66
Date:
25-Mar-04     Release date:   03-May-05    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q9C5H4  (Y3627_ARATH) -  VHS domain-containing protein At3g16270
Seq:
Struc:
 
Seq:
Struc:
690 a.a.
140 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 11 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     intracellular protein transport   1 term 

 

 
DOI no: 10.1023/B:JNMR.0000019239.44783.66 J Biomol NMR 29:205-206 (2004)
PubMed id: 15014234  
 
 
NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
B.López-Méndez, D.Pantoja-Uceda, T.Tomizawa, S.Koshiba, T.Kigawa, M.Shirouzu, T.Terada, M.Inoue, T.Yabuki, M.Aoki, E.Seki, T.Matsuda, H.Hirota, M.Yoshida, A.Tanaka, T.Osanai, M.Seki, K.Shinozaki, S.Yokoyama, P.Güntert.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
18807026 P.Güntert (2009).
Automated structure determination from NMR spectra.
  Eur Biophys J, 38, 129-143.  
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