 |
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
RNA binding protein
|
PDB id
|
|
|
|
1uil
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
RNA binding protein
|
 |
|
Title:
|
 |
Double-stranded RNA-binding motif of hypothetical protein bab28848
|
|
Structure:
|
 |
Double-stranded RNA-binding motif. Chain: a. Fragment: residues 1-113. Synonym: hypothetical protein bab28848. Engineered: yes
|
|
Source:
|
 |
Mus musculus. House mouse. Organism_taxid: 10090. Gene: riken cdna 2810480h04. Other_details: cell-free protein synthesis
|
|
NMR struc:
|
 |
20 models
|
 |
|
Authors:
|
 |
T.Nagata,Y.Muto,F.Hayashi,H.Hamana,M.Shirouzu,T.Terada, T.Kigawa,M.Inoue,T.Yabuki,M.Aoki,E.Seki,T.Matsuda,H.Hirota, M.Yoshida,N.Kobayashi,A.Tanaka,T.Osanai,Y.Matsuo, Y.Hayashizaki,S.Yokoyama,Riken Structural Genomics/proteomics Initiative (Rsgi)
|
|
Key ref:
|
 |
T.Nagata
et al.
Structure of double-Stranded RNA-Binding motif of hypothetical protein bab28848.
To be published,
|
 |
|
Date:
|
 |
|
17-Jul-03
|
Release date:
|
16-Nov-04
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
|
|
|
|
|
O70133
(DHX9_MOUSE) -
ATP-dependent RNA helicase A
|
|
|
|
Seq: Struc:
|
 |
 |
 |
1380 a.a.
113 a.a.*
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
PfamA domain |
 |
 |
PfamB domain |
 |
 |
 |
Secondary structure |
 |
|
*
PDB and UniProt seqs differ
at 13 residue positions (black
crosses)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class:
|
 |
E.C.3.6.4.13
- Rna helicase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
ATP + H2O = ADP + phosphate
|
 |
 |
 |
 |
 |
ATP
|
+
|
H(2)O
|
=
|
ADP
|
+
|
phosphate
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
 |
|
 |
|
 |
|
|
Gene Ontology (GO) functional annotation
|
|
|
|
 |
 |
 |
|
 |
 |
 |
 |
|
 |
|
Cellular component
|
intracellular
|
1 term
|
 |
|
Biochemical function
|
RNA binding
|
2 terms
|
 |
|
|
 |
 |
 |
 |
 |
 |
|