PDBsum entry 1ovq

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protein links
Structural genomics, unknown function PDB id
Protein chain
138 a.a. *
* Residue conservation analysis
PDB id:
Name: Structural genomics, unknown function
Title: Solution structure of the hypothetical protein yqgf from escherichia coli
Structure: Hypothetical protein yqgf. Chain: a. Engineered: yes
Source: Escherichia coli. Organism_taxid: 562. Gene: yqgf or b2949 or c3535. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
NMR struc: 25 models
Authors: D.Liu,Y.S.Wang,D.F.Wyss
Key ref: D.Liu et al. (2003). Solution structure of the hypothetical protein YqgF from Escherichia coli reveals an RNAse H fold. J Biomol NMR, 27, 389-392. PubMed id: 14512736
27-Mar-03     Release date:   04-Nov-03    
Go to PROCHECK summary

Protein chain
Pfam   ArchSchema ?
P0A8I1  (RUVX_ECOLI) -  Putative Holliday junction resolvase
138 a.a.
138 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     nucleic acid phosphodiester bond hydrolysis   6 terms 
  Biochemical function     nucleic acid binding     4 terms  


J Biomol NMR 27:389-392 (2003)
PubMed id: 14512736  
Solution structure of the hypothetical protein YqgF from Escherichia coli reveals an RNAse H fold.
D.Liu, Y.S.Wang, D.F.Wyss.
No abstract given.


Literature references that cite this PDB file's key reference

  PubMed id Reference
21219459 O.Humbert, M.S.Dorer, and N.R.Salama (2011).
Characterization of Helicobacter pylori factors that control transformation frequency and integration length during inter-strain DNA recombination.
  Mol Microbiol, 79, 387-401.  
18539731 J.R.Pohlhaus, D.T.Long, E.O'Reilly, and K.N.Kreuzer (2008).
The epsilon subunit of DNA polymerase III Is involved in the nalidixic acid-induced SOS response in Escherichia coli.
  J Bacteriol, 190, 5239-5247.  
17130173 M.M.Babu, L.M.Iyer, S.Balaji, and L.Aravind (2006).
The natural history of the WRKY-GCM1 zinc fingers and the relationship between transcription factors and transposons.
  Nucleic Acids Res, 34, 6505-6520.  
15916595 J.R.Pohlhaus, and K.N.Kreuzer (2005).
Norfloxacin-induced DNA gyrase cleavage complexes block Escherichia coli replication forks, causing double-stranded breaks in vivo.
  Mol Microbiol, 56, 1416-1429.  
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