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Lyase PDB id
1o0y
Jmol
Contents
Protein chains
251 a.a. *
Waters ×230
* Residue conservation analysis
Superseded by: 3r12
PDB id:
1o0y
Name: Lyase
Title: Crystal structure of deoxyribose-phosphate aldolase (tm1559) thermotoga maritima at 1.9 a resolution
Structure: Deoxyribose-phosphate aldolase. Chain: a, b. Synonym: phosphodeoxyriboaldolase, deoxyriboaldolase. Engineered: yes
Source: Thermotoga maritima. Organism_taxid: 2336. Gene: tm1559. Expressed in: escherichia coli. Expression_system_taxid: 562
Biol. unit: Dimer (from PQS)
Resolution:
1.90Å     R-factor:   0.179     R-free:   0.259
Authors: Joint Center For Structural Genomics (Jcsg)
Key ref: Joint center for structural genomics (jcsg) Crystal structure of deoxyribose-Phosphate aldolase (tm1559) from thermotoga maritima at 1.9 a resolution. To be published,
Date:
13-Sep-02     Release date:   25-Dec-02    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9X1P5  (DEOC_THEMA) -  Deoxyribose-phosphate aldolase
Seq:
Struc: 		248 a.a.
251 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.4.1.2.4  - Deoxyribose-phosphate aldolase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway: 		Deoxyribose-phosphate aldolase
      Reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde
2-deoxy-D-ribose 5-phosphate
 = D-glyceraldehyde 3-phosphate
 + acetaldehyde
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     metabolic process   2 terms 
  Biochemical function     catalytic activity     3 terms