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Structural protein PDB id
1luj
Jmol
Contents
Protein chains
501 a.a. *
71 a.a. *
* Residue conservation analysis
PDB id:
1luj
Name: Structural protein
Title: Crystal structure of the beta-catenin/icat complex
Structure: Beta-catenin. Chain: a. Fragment: residues 150-666. Engineered: yes. Beta-catenin-interacting protein icat. Chain: b. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562.
Biol. unit: Dimer (from PQS)
Resolution:
2.50Å     R-factor:   0.210     R-free:   0.255
Authors: T.A.Graham,W.K.Clements,D.Kimelman,W.Xu
Key ref:
T.A.Graham et al. (2002). The crystal structure of the beta-catenin/ICAT complex reveals the inhibitory mechanism of ICAT. Mol Cell, 10, 563-571. PubMed id: 12408824 DOI: 10.1016/S1097-2765(02)00637-8
Date:
22-May-02     Release date:   16-Oct-02    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P35222  (CTNB1_HUMAN) -  Catenin beta-1
Seq:
Struc:
 
Seq:
Struc:
781 a.a.
501 a.a.
Protein chain
Pfam   ArchSchema ?
Q9NSA3  (CNBP1_HUMAN) -  Beta-catenin-interacting protein 1
Seq:
Struc:
81 a.a.
71 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   4 terms 
  Biological process     anterior/posterior pattern formation   14 terms 
  Biochemical function     binding     4 terms  

 

 
DOI no: 10.1016/S1097-2765(02)00637-8 Mol Cell 10:563-571 (2002)
PubMed id: 12408824  
 
 
The crystal structure of the beta-catenin/ICAT complex reveals the inhibitory mechanism of ICAT.
T.A.Graham, W.K.Clements, D.Kimelman, W.Xu.
 
  ABSTRACT  
 
Beta-catenin is a multifunctional protein involved in both cell adhesion and transcriptional activation. Transcription mediated by the beta-catenin/Tcf complex is involved in embryological development and is upregulated in various cancers. We have determined the crystal structure at 2.5 A resolution of a complex between beta-catenin and ICAT, a protein that prevents the interaction between beta-catenin and Tcf/Lef family transcription factors. ICAT contains a 3-helix bundle that binds armadillo repeats 10-12 and a C-terminal tail that, similar to Tcf and E-cadherin, binds in the groove formed by armadillo repeats 5-9 of beta-catenin. We show that ICAT selectively inhibits beta-catenin/Tcf binding in vivo, without disrupting beta-catenin/cadherin interactions. Thus, it should be possible to design cancer therapeutics that inhibit beta-catenin-mediated transcriptional activation without interfering with cell adhesion.
 
  Selected figure(s)  
 
Figure 4.
Figure 4. β-Catenin Phe660 and Arg661 Are Required for ICAT Bindingβ-catenin carrying the mutations F660A/R661A (mut βCat) was tested for its ability to bind ICAT in vitro. Wild-type (lane 1) but not mutant (lane 2) β-catenin is able to coprecipitate ICAT. All of the proteins were ^35S-labeled and mixed as described. β-catenin was immunoprecipitated via its HA-epitope tag. Lanes 4–6 show protein levels prior to immunoprecipitation.
Figure 6.
Figure 6. ICAT Selectively Blocks Tcf Binding to β-Catenin In VivoThe ability of β-catenin to bind either XTcf3-HA or C-cadherin-HA in the presence or absence of ICAT was tested in Xenopus embryos. Equivalent levels of GFP RNA were injected into embryos that did not receive ICAT RNA. Embryo lysates were immunoprecipitated (lanes 6–10) for the FLAG epitope tag on β-catenin and probed with an anti-HA antibody. Lanes 1–5 correspond to lanes 6–10 and show the levels of proteins in total lysates prior to immunoprecipitation. Lanes 1 and 6 show results from uninjected embryos. ICAT prevents coprecipitation of XTcf3 (lane 8) but not C-cad (lane 10) with β-catenin.
 
  The above figures are reprinted by permission from Cell Press: Mol Cell (2002, 10, 563-571) copyright 2002.  
  Figures were selected by an automated process.  

Literature references that cite this PDB file's key reference

  PubMed id Reference
21182262 S.Mokhtarzada, C.Yu, A.Brickenden, and W.Y.Choy (2011).
Structural characterization of partially disordered human chibby: insights into its function in the wnt-signaling pathway.
  Biochemistry, 50, 715-726.  
19901072 P.M.Evans, X.Chen, W.Zhang, and C.Liu (2010).
KLF4 interacts with beta-catenin/TCF4 and blocks p300/CBP recruitment by beta-catenin.
  Mol Cell Biol, 30, 372-381.  
20082155 Q.Yu, A.Sharma, and J.M.Sen (2010).
TCF1 and beta-catenin regulate T cell development and function.
  Immunol Res, 47, 45-55.  
19759396 H.J.Choi, J.C.Gross, S.Pokutta, and W.I.Weis (2009).
Interactions of plakoglobin and beta-catenin with desmosomal cadherins: basis of selective exclusion of alpha- and beta-catenin from desmosomes.
  J Biol Chem, 284, 31776-31788.
PDB code: 3ifq
18164181 F.Liu, S.Kohlmeier, and C.Y.Wang (2008).
Wnt signaling and skeletal development.
  Cell Signal, 20, 999.  
18397998 M.Chen, M.Zhu, H.Awad, T.F.Li, T.J.Sheu, B.F.Boyce, D.Chen, and R.J.O'Keefe (2008).
Inhibition of beta-catenin signaling causes defects in postnatal cartilage development.
  J Cell Sci, 121, 1455-1465.  
18511409 M.Z.Hossain, Q.Yu, M.Xu, and J.M.Sen (2008).
ICAT expression disrupts beta-catenin-TCF interactions and impairs survival of thymocytes and activated mature T cells.
  Int Immunol, 20, 925-935.  
18576323 M.Zhu, M.Chen, M.Zuscik, Q.Wu, Y.J.Wang, R.N.Rosier, R.J.O'Keefe, and D.Chen (2008).
Inhibition of beta-catenin signaling in articular chondrocytes results in articular cartilage destruction.
  Arthritis Rheum, 58, 2053-2064.  
17660262 M.Ritco-Vonsovici, A.Ababou, and M.Horton (2007).
Molecular plasticity of beta-catenin: new insights from single-molecule measurements and MD simulation.
  Protein Sci, 16, 1984-1998.  
17143292 D.Kimelman, and W.Xu (2006).
beta-catenin destruction complex: insights and questions from a structural perspective.
  Oncogene, 25, 7482-7491.  
16824055 F.Tang, Y.Peng, J.J.Nau, E.J.Kauffman, and L.S.Weisman (2006).
Vac8p, an armadillo repeat protein, coordinates vacuole inheritance with multiple vacuolar processes.
  Traffic, 7, 1368-1377.  
16293619 H.J.Choi, A.H.Huber, and W.I.Weis (2006).
Thermodynamics of beta-catenin-ligand interactions: the roles of the N- and C-terminal tails in modulating binding affinity.
  J Biol Chem, 281, 1027-1038.  
16897815 J.E.Pongracz, S.M.Parnell, T.Jones, G.Anderson, and E.J.Jenkinson (2006).
Overexpression of ICAT highlights a role for catenin-mediated canonical Wnt signalling in early T cell development.
  Eur J Immunol, 36, 2376-2383.  
16847334 J.Liu, H.Wang, Y.Zuo, and S.R.Farmer (2006).
Functional interaction between peroxisome proliferator-activated receptor gamma and beta-catenin.
  Mol Cell Biol, 26, 5827-5837.  
16690606 T.F.Li, D.Chen, Q.Wu, M.Chen, T.J.Sheu, E.M.Schwarz, H.Drissi, M.Zuscik, and R.J.O'Keefe (2006).
Transforming growth factor-beta stimulates cyclin D1 expression through activation of beta-catenin signaling in chondrocytes.
  J Biol Chem, 281, 21296-21304.  
15738986 H.J.Dyson, and P.E.Wright (2005).
Intrinsically unstructured proteins and their functions.
  Nat Rev Mol Cell Biol, 6, 197-208.  
16141201 L.N.Song, and E.P.Gelmann (2005).
Interaction of beta-catenin and TIF2/GRIP1 in transcriptional activation by the androgen receptor.
  J Biol Chem, 280, 37853-37867.  
15554942 A.Schambony, M.Kunz, and D.Gradl (2004).
Cross-regulation of Wnt signaling and cell adhesion.
  Differentiation, 72, 307-318.  
15473860 C.Y.Logan, and R.Nusse (2004).
The Wnt signaling pathway in development and disease.
  Annu Rev Cell Dev Biol, 20, 781-810.  
15112230 J.M.Gooding, K.L.Yap, and M.Ikura (2004).
The cadherin-catenin complex as a focal point of cell adhesion and signalling: new insights from three-dimensional structures.
  Bioessays, 26, 497-511.  
15148409 K.Satoh, M.Kasai, T.Ishidao, K.Tago, S.Ohwada, Y.Hasegawa, T.Senda, S.Takada, S.Nada, T.Nakamura, and T.Akiyama (2004).
Anteriorization of neural fate by inhibitor of beta-catenin and T cell factor (ICAT), a negative regulator of Wnt signaling.
  Proc Natl Acad Sci U S A, 101, 8017-8021.  
14660579 T.Sekiya, S.Adachi, K.Kohu, T.Yamada, O.Higuchi, Y.Furukawa, Y.Nakamura, T.Nakamura, K.Tashiro, S.Kuhara, S.Ohwada, and T.Akiyama (2004).
Identification of BMP and activin membrane-bound inhibitor (BAMBI), an inhibitor of transforming growth factor-beta signaling, as a target of the beta-catenin pathway in colorectal tumor cells.
  J Biol Chem, 279, 6840-6846.  
15327769 Y.Xing, W.K.Clements, I.Le Trong, T.R.Hinds, R.Stenkamp, D.Kimelman, and W.Xu (2004).
Crystal structure of a beta-catenin/APC complex reveals a critical role for APC phosphorylation in APC function.
  Mol Cell, 15, 523-533.
PDB code: 1th1
12569091 J.Lyu, F.Costantini, E.H.Jho, and C.K.Joo (2003).
Ectopic expression of Axin blocks neuronal differentiation of embryonic carcinoma P19 cells.
  J Biol Chem, 278, 13487-13495.  
12657632 M.Fasolini, X.Wu, M.Flocco, J.Y.Trosset, U.Oppermann, and S.Knapp (2003).
Hot spots in Tcf4 for the interaction with beta-catenin.
  J Biol Chem, 278, 21092-21098.  
12874278 M.Kanamori, P.Sandy, S.Marzinotto, R.Benetti, C.Kai, Y.Hayashizaki, C.Schneider, and H.Suzuki (2003).
The PDZ protein tax-interacting protein-1 inhibits beta-catenin transcriptional activity and growth of colorectal cancer cells.
  J Biol Chem, 278, 38758-38764.  
12702867 T.Pawson, and P.Nash (2003).
Assembly of cell regulatory systems through protein interaction domains.
  Science, 300, 445-452.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.