 |
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Ligase
|
 |
|
Title:
|
 |
Solution nmr structure of brct domain of t. Thermophilus: northeast structural genomics consortium target wr64tt
|
|
Structure:
|
 |
DNA ligase. Chain: a. Fragment: brct domain. Engineered: yes
|
|
Source:
|
 |
Thermus thermophilus. Organism_taxid: 274. Gene: dnlj. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
|
|
NMR struc:
|
 |
10 models
|
 |
|
Authors:
|
 |
G.Sahota,B.L.Dixon,Y.P.Huang,J.Aramini,D.Monleon, D.Bhattacharya,G.V.T.Swapna,C.Yin,R.Xiao,S.Anderson, R.Tejero,G.T.Montelione,Northeast Structural Genomics Consortium (Nesg)
|
|
Key ref:
|
 |
G.Sahota
et al.
Solution nmr structure of the brct domain from thermus thermophilus DNA ligase.
To be published,
|
 |
|
Date:
|
 |
|
14-Mar-02
|
Release date:
|
16-Sep-03
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
P26996
(DNLJ_THET8) -
DNA ligase
|
|
|
|
Seq: Struc:
|
 |
 |
 |
676 a.a.
92 a.a.*
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
PfamA domain |
 |
 |
 |
Secondary structure |
 |
 |
CATH domain |
 |
|
*
PDB and UniProt seqs differ
at 1 residue position (black
cross)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class:
|
 |
E.C.6.5.1.2
- Dna ligase (NAD(+)).
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
NAD+ + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + nicotinamide nucleotide + (deoxyribonucleotide)(n+m)
|
 |
 |
 |
 |
 |
NAD(+)
|
+
|
(deoxyribonucleotide)(n)
|
+
|
(deoxyribonucleotide)(m)
|
=
|
AMP
|
+
|
nicotinamide nucleotide
|
+
|
(deoxyribonucleotide)(n+m)
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
 |
|
 |
|
 |
|
|
Gene Ontology (GO) functional annotation
|
|
|
|
 |
 |
 |
|
 |
 |
 |
 |
|
 |
|
Cellular component
|
intracellular
|
1 term
|
 |
|
|
 |
 |
 |
 |
 |
 |
|