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Cell adhesion PDB id
1l6z
Jmol
Contents
Protein chain
203 a.a. *
Ligands
NDG
NAG ×2
NAG-NAG-BMA
Waters ×26
* Residue conservation analysis
PDB id:
1l6z
Name: Cell adhesion
Title: Crystal structure of murine ceacam1a[1,4]: a coronavirus rec cell adhesion molecule in the cea family
Structure: Biliary glycoprotein c. Chain: a. Synonym: biliary glycoprotein c, cd66a. Engineered: yes
Source: Mus musculus. House mouse. Organism_taxid: 10090. Gene: murine ceacam1a. Expressed in: cricetulus griseus. Expression_system_taxid: 10029. Expression_system_cell: ovary cells.
Resolution:
3.32Å     R-factor:   0.295     R-free:   0.329
Authors: K.Tan,B.D.Zelus,R.Meijers,J.-H.Liu,J.M.Bergelson,N.Duke,R.Zh A.Joachimiak,K.V.Holmes,J.-H.Wang
Key ref:
K.Tan et al. (2002). Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family. EMBO J, 21, 2076-2086. PubMed id: 11980704 DOI: 10.1093/emboj/21.9.2076
Date:
14-Mar-02     Release date:   14-Sep-02    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P31809  (CEAM1_MOUSE) -  Carcinoembryonic antigen-related cell adhesion molecule 1
Seq:
Struc:
 
Seq:
Struc:
521 a.a.
203 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Biochemical function     protein binding     1 term  

 

 
DOI no: 10.1093/emboj/21.9.2076 EMBO J 21:2076-2086 (2002)
PubMed id: 11980704  
 
 
Crystal structure of murine sCEACAM1a[1,4]: a coronavirus receptor in the CEA family.
K.Tan, B.D.Zelus, R.Meijers, J.H.Liu, J.M.Bergelson, N.Duke, R.Zhang, A.Joachimiak, K.V.Holmes, J.H.Wang.
 
  ABSTRACT  
 
CEACAM1 is a member of the carcinoembryonic antigen (CEA) family. Isoforms of murine CEACAM1 serve as receptors for mouse hepatitis virus (MHV), a murine coronavirus. Here we report the crystal structure of soluble murine sCEACAM1a[1,4], which is composed of two Ig-like domains and has MHV neutralizing activity. Its N-terminal domain has a uniquely folded CC' loop that encompasses key virus-binding residues. This is the first atomic structure of any member of the CEA family, and provides a prototypic architecture for functional exploration of CEA family members. We discuss the structural basis of virus receptor activities of murine CEACAM1 proteins, binding of Neisseria to human CEACAM1, and other homophilic and heterophilic interactions of CEA family members.
 
  Selected figure(s)  
 
Figure 1.
Figure 1 Stereo view of the ribbon drawing of msCEACAM1a[1,4], which contains two Ig-like domains. The CC' loop in the N-terminal domain (D1), which is involved in binding of MHV and other ligands, is highlighted in yellow. The predicted key virus-binding residue Ile41 on the CC' loop is shown in red in ball-and-stick representation. The FG loop of D1, another biologically important element, is shown in violet. The carbohydrate moieties are drawn in gray in ball-and-stick representation. The glycan at Asn70 that is conserved in the whole CEA family is labeled. The figure was prepared using MOLSCRIPT (Kraulis, 1991).
Figure 3.
Figure 3 A comparative view of structures of several virus receptors, including: msCEACAM1a, the receptor for murine coronavirus MHV; ICAM1, the receptor for the major group of rhinoviruses; CD4, the primary receptor for HIV; and CD46, the receptor for measles virus. Only their N-terminal domains are shown here. The key virus-binding motifs with unique topological features are highlighted in red.
 
  The above figures are reprinted from an Open Access publication published by Macmillan Publishers Ltd: EMBO J (2002, 21, 2076-2086) copyright 2002.  
  Figures were selected by the author.  

Literature references that cite this PDB file's key reference

  PubMed id Reference
20652053 J.Das Sarma (2010).
A mechanism of virus-induced demyelination.
  Interdiscip Perspect Infect Dis, 2010, 109239.  
20132533 R.Kammerer, and W.Zimmermann (2010).
Coevolution of activating and inhibitory receptors within mammalian carcinoembryonic antigen families.
  BMC Biol, 8, 12.  
19285068 A.Gu, W.Tsark, K.V.Holmes, and J.E.Shively (2009).
Role of Ceacam1 in VEGF induced vasculogenesis of murine embryonic stem cell-derived embryoid bodies in 3D culture.
  Exp Cell Res, 315, 1668-1682.  
19948502 E.Klaile, O.Vorontsova, K.Sigmundsson, M.M.Müller, B.B.Singer, L.G.Ofverstedt, S.Svensson, U.Skoglund, and B.Obrink (2009).
The CEACAM1 N-terminal Ig domain mediates cis- and trans-binding and is essential for allosteric rearrangements of CEACAM1 microclusters.
  J Cell Biol, 187, 553-567.  
19692601 J.Das Sarma, L.C.Kenyon, S.T.Hingley, and K.S.Shindler (2009).
Mechanisms of primary axonal damage in a viral model of multiple sclerosis.
  J Neurosci, 29, 10272-10280.  
18275518 C.T.Ha, R.Waterhouse, J.Warren, W.Zimmermann, and G.S.Dveksler (2008).
N-glycosylation is required for binding of murine pregnancy-specific glycoproteins 17 and 19 to the receptor CD9.
  Am J Reprod Immunol, 59, 251-258.  
18086185 N.Korotkova, Y.Yang, I.Le Trong, E.Cota, B.Demeler, J.Marchant, W.E.Thomas, R.E.Stenkamp, S.L.Moseley, and S.Matthews (2008).
Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.
  Mol Microbiol, 67, 420-434.
PDB codes: 2qsq 2qst 2ver
18650418 S.S.Zhang, C.G.Park, P.Zhang, S.S.Bartra, G.V.Plano, J.D.Klena, M.Skurnik, B.J.Hinnebusch, and T.Chen (2008).
Plasminogen Activator Pla of Yersinia pestis Utilizes Murine DEC-205 (CD205) as a Receptor to Promote Dissemination.
  J Biol Chem, 283, 31511-31521.  
17363299 C.Santiago, A.Ballesteros, C.Tami, L.Martínez-Muñoz, G.G.Kaplan, and J.M.Casasnovas (2007).
Structures of T Cell immunoglobulin mucin receptors 1 and 2 reveal mechanisms for regulation of immune responses by the TIM receptor family.
  Immunity, 26, 299-310.
PDB codes: 2or7 2or8
17945019 R.Kammerer, T.Popp, S.Härtle, B.B.Singer, and W.Zimmermann (2007).
Species-specific evolution of immune receptor tyrosine based activation motif-containing CEACAM1-related immune receptors in the dog.
  BMC Evol Biol, 7, 196.  
16953805 S.Villullas, D.J.Hill, R.B.Sessions, J.Rea, and M.Virji (2007).
Mutational analysis of human CEACAM1: the potential of receptor polymorphism in increasing host susceptibility to bacterial infection.
  Cell Microbiol, 9, 329-346.  
16929097 A.Fedarovich, J.Tomberg, R.A.Nicholas, and C.Davies (2006).
Structure of the N-terminal domain of human CEACAM1: binding target of the opacity proteins during invasion of Neisseria meningitidis and N. gonorrhoeae.
  Acta Crystallogr D Biol Crystallogr, 62, 971-979.
PDB code: 2gk2
16575524 A.Rinninger, C.Richet, A.Pons, G.Kohla, R.Schauer, H.C.Bauer, J.P.Zanetta, and R.Vlasak (2006).
Localisation and distribution of O-acetylated N-acetylneuraminic acids, the endogenous substrates of the hemagglutinin-esterases of murine coronaviruses, in mouse tissue.
  Glycoconj J, 23, 73-84.  
16415002 M.H.Verheije, T.Würdinger, V.W.van Beusechem, C.A.de Haan, W.R.Gerritsen, and P.J.Rottier (2006).
Redirecting coronavirus to a nonnative receptor through a virus-encoded targeting adapter.
  J Virol, 80, 1250-1260.  
16882658 N.Korotkova, E.Cota, Y.Lebedin, S.Monpouet, J.Guignot, A.L.Servin, S.Matthews, and S.L.Moseley (2006).
A subfamily of Dr adhesins of Escherichia coli bind independently to decay-accelerating factor and the N-domain of carcinoembryonic antigen.
  J Biol Chem, 281, 29120-29130.  
16724098 S.D.Gray-Owen, and R.S.Blumberg (2006).
CEACAM1: contact-dependent control of immunity.
  Nat Rev Immunol, 6, 433-446.  
17057197 T.Nagaishi, H.Iijima, A.Nakajima, D.Chen, and R.S.Blumberg (2006).
Role of CEACAM1 as a regulator of T cells.
  Ann N Y Acad Sci, 1072, 155-175.  
17081782 T.Nagaishi, L.Pao, S.H.Lin, H.Iijima, A.Kaser, S.W.Qiao, Z.Chen, J.Glickman, S.M.Najjar, A.Nakajima, B.G.Neel, and R.S.Blumberg (2006).
SHP1 phosphatase-dependent T cell inhibition by CEACAM1 adhesion molecule isoforms.
  Immunity, 25, 769-781.  
15831825 A.L.Servin (2005).
Pathogenesis of Afa/Dr diffusely adhering Escherichia coli.
  Clin Microbiol Rev, 18, 264-292.  
15987510 A.S.McLellan, W.Zimmermann, and T.Moore (2005).
Conservation of pregnancy-specific glycoprotein (PSG) N domains following independent expansions of the gene families in rodents and primates.
  BMC Evol Biol, 5, 39.  
15901639 S.H.Li, R.K.Lee, Y.L.Hsiao, and Y.H.Chen (2005).
Demonstration of a glycoprotein derived from the Ceacam10 gene in mouse seminal vesicle secretions.
  Biol Reprod, 73, 546-553.  
16306602 T.Würdinger, M.H.Verheije, K.Broen, B.J.Bosch, B.J.Haijema, C.A.de Haan, V.W.van Beusechem, W.R.Gerritsen, and P.J.Rottier (2005).
Soluble receptor-mediated targeting of mouse hepatitis coronavirus to the human epidermal growth factor receptor.
  J Virol, 79, 15314-15322.  
15331748 E.Hemmila, C.Turbide, M.Olson, S.Jothy, K.V.Holmes, and N.Beauchemin (2004).
Ceacam1a-/- mice are completely resistant to infection by murine coronavirus mouse hepatitis virus A59.
  J Virol, 78, 10156-10165.  
14970176 H.Iijima, M.F.Neurath, T.Nagaishi, J.N.Glickman, E.E.Nieuwenhuis, A.Nakajima, D.Chen, I.J.Fuss, N.Utku, D.N.Lewicki, C.Becker, T.M.Gallagher, K.V.Holmes, and R.S.Blumberg (2004).
Specific regulation of T helper cell 1-mediated murine colitis by CEACAM1.
  J Exp Med, 199, 471-482.  
15308703 J.H.Schickli, L.B.Thackray, S.G.Sawicki, and K.V.Holmes (2004).
The N-terminal region of the murine coronavirus spike glycoprotein is associated with the extended host range of viruses from persistently infected murine cells.
  J Virol, 78, 9073-9083.  
15196242 M.Lehoux, A.Jacques, S.Lusignan, and L.Lamontagne (2004).
Murine viral hepatitis involves NK cell depletion associated with virus-induced apoptosis.
  Clin Exp Immunol, 137, 41-51.  
15184366 M.M.Comegys, S.H.Lin, D.Rand, D.Britt, D.Flanagan, H.Callanan, K.Brilliant, and D.C.Hixson (2004).
Two variable regions in carcinoembryonic antigen-related cell adhesion molecule1 N-terminal domains located in or next to monoclonal antibody and adhesion epitopes show evidence of recombination in rat but not in human.
  J Biol Chem, 279, 35063-35078.  
15331724 R.Ye, C.Montalto-Morrison, and P.S.Masters (2004).
Genetic analysis of determinants for spike glycoprotein assembly into murine coronavirus virions: distinct roles for charge-rich and cysteine-rich regions of the endodomain.
  J Virol, 78, 9904-9917.  
12657049 D.J.Hill, and M.Virji (2003).
A novel cell-binding mechanism of Moraxella catarrhalis ubiquitous surface protein UspA: specific targeting of the N-domain of carcinoembryonic antigen-related cell adhesion molecules by UspA1.
  Mol Microbiol, 48, 117-129.  
12970410 E.Ontiveros, T.S.Kim, T.M.Gallagher, and S.Perlman (2003).
Enhanced virulence mediated by the murine coronavirus, mouse hepatitis virus strain JHM, is associated with a glycine at residue 310 of the spike glycoprotein.
  J Virol, 77, 10260-10269.  
12571231 M.Taheri, H.U.Saragovi, and C.P.Stanners (2003).
The adhesion and differentiation-inhibitory activities of the immunoglobulin superfamily member, carcinoembryonic antigen, can be independently blocked.
  J Biol Chem, 278, 14632-14639.  
  12902163 S.H.Lee, K.Dimock, D.A.Gray, N.Beauchemin, K.V.Holmes, M.Belouchi, J.Realson, and S.M.Vidal (2003).
Maneuvering for advantage: the genetics of mouse susceptibility to virus infection.
  Trends Genet, 19, 447-457.  
12627395 T.Stehle, and T.S.Dermody (2003).
Structural evidence for common functions and ancestry of the reovirus and adenovirus attachment proteins.
  Rev Med Virol, 13, 123-132.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.