spacer
spacer

PDBsum entry 1jr9

Go to PDB code: 
protein metals links
Oxidoreductase PDB id
1jr9
Jmol
Contents
Protein chain
201 a.a. *
Metals
_ZN
_MN
Waters ×63
* Residue conservation analysis
PDB id:
1jr9
Name: Oxidoreductase
Title: Crystal structure of manganese superoxide dismutases from bacillus halodenitrificans
Structure: Manganese superoxide dismutase. Chain: a. Fragment: green protein. Ec: 1.15.1.1
Source: Virgibacillus halodenitrificans. Organism_taxid: 1482. Other_details: cytoplasm
Biol. unit: Dimer (from PDB file)
Resolution:
2.80Å     R-factor:   0.220     R-free:   0.289
Authors: J.Liao,M.Y.Liu,T.Chang,M.Li,J.Legall,L.L.Gui,J.P.Zhang, T.Jiang,D.C.Liang,W.R.Chang
Key ref: J.Liao et al. (2002). Crystallization and preliminary crystallographic analysis of manganese superoxide dismutase from Bacillus halodenitrificans. Biochem Biophys Res Commun, 294, 60-62. PubMed id: 12054740 DOI: 10.1016/S0006-291X(02)00436-9
Date:
13-Aug-01     Release date:   14-Aug-02    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q7SIC3  (SODM_BACHA) -  Superoxide dismutase [Mn] (Fragment)
Seq:
Struc:
202 a.a.
201 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Gene Ontology (GO) functional annotation 
  GO annot!
  Cellular component     cytoplasm   1 term 
  Biological process     oxidation-reduction process   3 terms 
  Biochemical function     oxidoreductase activity     3 terms  

 

 
DOI no: 10.1016/S0006-291X(02)00436-9 Biochem Biophys Res Commun 294:60-62 (2002)
PubMed id: 12054740  
 
 
Crystallization and preliminary crystallographic analysis of manganese superoxide dismutase from Bacillus halodenitrificans.
J.Liao, M.Li, M.Y.Liu, T.Chang, J.Le Gall, L.L.Gui, J.P.Zhang, D.C.Liang, W.R.Chang.
 
  ABSTRACT  
 
Manganese superoxide dismutase (GP-MnSOD), a component of the so-called 'green protein' (green protein complex) from the facultative anaerobic halodenitrifier Bacillus halodenitrificans, has been crystallized using the hanging-drop vapor diffusion method. Crystals have unit-cell parameters a=b=93.4 A, c=65.0 A, and belong to the space group P4(3)2(1)2. Preliminary analysis indicates there is one monomer in each asymmetric unit. The structural information from this enzyme will enrich our knowledge on its high catalytic activity and its possible role in green protein complex.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
18640608 K.Isobe, A.Kato, Y.Sasaki, M.Kataoka, J.Ogawa, A.Iwasaki, J.Hasegawa, and S.Shimizu (2008).
Superoxide dismutases exhibit oxidase activity on aldehyde alcohols similar to alcohol oxidase from Paenibacillus sp. AIU 311.
  J Biosci Bioeng, 105, 666-670.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.