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Hydrolase PDB id
1j1r
Jmol
Contents
Protein chain
261 a.a. *
Ligands
NAG
ADE
Waters ×203
* Residue conservation analysis
PDB id:
1j1r
Name: Hydrolase
Title: Structure of pokeweed antiviral protein from seeds (pap-s1) with adenine
Structure: Antiviral protein s. Chain: a. Synonym: pokeweed antiviral protein, pap-s1, n-glycosidase. Ec: 3.2.2.22
Source: Phytolacca americana. American pokeweed. Organism_taxid: 3527. Tissue: seeds
Biol. unit: Dimer (from PQS)
Resolution:
1.90Å     R-factor:   0.168     R-free:   0.228
Authors: K.Watanabe,E.Sato,E.Honjo,H.Motoshima,H.Kurokawa,B.Mikami, A.F.Monzingo,J.D.Robertus,H.Fujii,A.Hidaka
Key ref: K.Watanabe et al. Crystal structure of pokweed antiviral protein from seeds (pap-S1) at 1.8 angstrom resolution. To be published,
Date:
14-Dec-02     Release date:   03-Feb-04    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P23339  (RIPS_PHYAM) -  Antiviral protein S
Seq:
Struc:
261 a.a.
261 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.2.2.22  - rRNA N-glycosylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Endohydrolysis of the N-glycosidic bond at one specific adenosine on the 28S rRNA.
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     defense response   3 terms 
  Biochemical function     hydrolase activity     2 terms