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Oxidoreductase
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PDB id
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1gra
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Contents |
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* Residue conservation analysis
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Enzyme class:
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E.C.1.8.1.7
- Glutathione-disulfide reductase.
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Reaction:
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2 glutathione + NADP+ = glutathione disulfide + NADPH
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2
×
glutathione
Bound ligand (Het Group name = )
corresponds exactly
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+
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NADP(+)
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=
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glutathione disulfide
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+
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NADPH
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Cofactor:
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FAD
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FAD
Bound ligand (Het Group name =
FAD)
corresponds exactly
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Gene Ontology (GO) functional annotation
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Cellular component
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soluble fraction
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5 terms
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Biological process
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oxidation-reduction process
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6 terms
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Biochemical function
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electron carrier activity
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8 terms
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DOI no:
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J Mol Biol
210:163-180
(1989)
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PubMed id:
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Substrate binding and catalysis by glutathione reductase as derived from refined enzyme: substrate crystal structures at 2 A resolution.
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P.A.Karplus,
G.E.Schulz.
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ABSTRACT
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The X-ray structure analyses of four glutathione reductase complexes and
derivatives have been extended to 2 A resolution and refined. The results are
discussed in conjunction with the structure of the oxidized native enzyme known
at 1.54 A resolution. While the residual co-ordinate errors are around 0.2 A,
some significant shifts even in this range could be established. Points of
particular interest are the 3.2 A approach of C4N of nicotinamide to N5F of
flavin in hydride transfer geometry, the hydrogen bond geometries of the
2'-phosphate of NADPH as compared to inferior geometries for an inorganic
phosphate binding together with NADH, the differential mobilities of parts of
the substrates as derived from refined atomic temperature factors, and the
stabilization of the thiolate of the proximal Cys63 by conformational changes of
neighboring residues as well as by flavin. In addition, catalytically competent
His467' is seen to interact more optimally with the sulfur of glutathione-I than
with the distal sulfur of Cys58. The observed participation of water molecules
for both NADPH and glutathione binding is so extensive that a prediction of the
binding mode merely from the polypeptide structure would be very difficult. The
accurately known geometries allowed us to draw some conclusions on the enzyme
mechanism and suggest a possible scenario of the catalysis.
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Literature references that cite this PDB file's key reference
|
|
 |
| |
PubMed id
|
 |
Reference
|
 |
|
|
|
 |
K.P.Bhabak,
B.J.Bhuyan,
and
G.Mugesh
(2011).
Bioinorganic and medicinal chemistry: aspects of gold(i)-protein complexes.
|
| |
Dalton Trans, 40,
2099-2111.
|
 |
|
|
|
|
 |
H.Kadokura,
and
J.Beckwith
(2010).
Mechanisms of oxidative protein folding in the bacterial cell envelope.
|
| |
Antioxid Redox Signal, 13,
1231-1246.
|
 |
|
|
|
|
 |
I.F.Sevrioukova
(2009).
Redox-linked conformational dynamics in apoptosis-inducing factor.
|
| |
J Mol Biol, 390,
924-938.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
J.R.Wallen,
T.C.Mallett,
W.Boles,
D.Parsonage,
C.M.Furdui,
P.A.Karplus,
and
A.Claiborne
(2009).
Crystal structure and catalytic properties of Bacillus anthracis CoADR-RHD: implications for flavin-linked sulfur trafficking.
|
| |
Biochemistry, 48,
9650-9667.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
T.Osawa,
K.Ito,
H.Inanaga,
O.Nureki,
K.Tomita,
and
T.Numata
(2009).
Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon.
|
| |
Structure, 17,
713-724.
|
 |
|
|
|
|
 |
A.Wang,
J.C.Rodríguez,
H.Han,
E.Schönbrunn,
and
M.Rivera
(2008).
X-ray crystallographic and solution state nuclear magnetic resonance spectroscopic investigations of NADP+ binding to ferredoxin NADP reductase from Pseudomonas aeruginosa.
|
| |
Biochemistry, 47,
8080-8093.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
D.S.Berkholz,
H.R.Faber,
S.N.Savvides,
and
P.A.Karplus
(2008).
Catalytic cycle of human glutathione reductase near 1 A resolution.
|
| |
J Mol Biol, 382,
371-384.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
F.Angelucci,
A.E.Miele,
G.Boumis,
D.Dimastrogiovanni,
M.Brunori,
and
A.Bellelli
(2008).
Glutathione reductase and thioredoxin reductase at the crossroad: the structure of Schistosoma mansoni thioredoxin glutathione reductase.
|
| |
Proteins, 72,
936-945.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
J.R.Wallen,
C.Paige,
T.C.Mallett,
P.A.Karplus,
and
A.Claiborne
(2008).
Pyridine nucleotide complexes with Bacillus anthracis coenzyme A-disulfide reductase: a structural analysis of dual NAD(P)H specificity.
|
| |
Biochemistry, 47,
5182-5193.
|
 |
|
PDB codes:
|
 |
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|
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|
|
 |
M.A.Musumeci,
A.K.Arakaki,
D.V.Rial,
D.L.Catalano-Dupuy,
and
E.A.Ceccarelli
(2008).
Modulation of the enzymatic efficiency of ferredoxin-NADP(H) reductase by the amino acid volume around the catalytic site.
|
| |
FEBS J, 275,
1350-1366.
|
 |
|
|
|
|
 |
N.Rouhier,
S.D.Lemaire,
and
J.P.Jacquot
(2008).
The role of glutathione in photosynthetic organisms: emerging functions for glutaredoxins and glutathionylation.
|
| |
Annu Rev Plant Biol, 59,
143-166.
|
 |
|
|
|
|
 |
R.C.Bruckner,
G.Zhao,
P.Ferreira,
and
M.S.Jorns
(2007).
A mobile tryptophan is the intrinsic charge transfer donor in a flavoenzyme essential for nikkomycin antibiotic biosynthesis.
|
| |
Biochemistry, 46,
819-827.
|
 |
|
|
|
|
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T.N.Gustafsson,
T.Sandalova,
J.Lu,
A.Holmgren,
and
G.Schneider
(2007).
High-resolution structures of oxidized and reduced thioredoxin reductase from Helicobacter pylori.
|
| |
Acta Crystallogr D Biol Crystallogr, 63,
833-843.
|
 |
|
PDB codes:
|
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|
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W.Zhang,
M.Zhang,
W.Zhu,
Y.Zhou,
S.Wanduragala,
D.Rewinkel,
J.J.Tanner,
and
D.F.Becker
(2007).
Redox-induced changes in flavin structure and roles of flavin N(5) and the ribityl 2'-OH group in regulating PutA--membrane binding.
|
| |
Biochemistry, 46,
483-491.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
J.Zhang,
F.E.Frerman,
and
J.J.Kim
(2006).
Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool.
|
| |
Proc Natl Acad Sci U S A, 103,
16212-16217.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
K.Ito,
M.Nakanishi,
W.C.Lee,
H.Sasaki,
S.Zenno,
K.Saigo,
Y.Kitade,
and
M.Tanokura
(2006).
Three-dimensional structure of AzoR from Escherichia coli. An oxidereductase conserved in microorganisms.
|
| |
J Biol Chem, 281,
20567-20576.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
L.Li,
and
P.F.Cook
(2006).
The 2'-phosphate of NADP is responsible for proper orientation of the nicotinamide ring in the oxidative decarboxylation reaction catalyzed by sheep liver 6-phosphogluconate dehydrogenase.
|
| |
J Biol Chem, 281,
36803-36810.
|
 |
|
|
|
|
 |
P.J.McMillan,
L.D.Arscott,
D.P.Ballou,
K.Becker,
C.H.Williams,
and
S.Müller
(2006).
Identification of acid-base catalytic residues of high-Mr thioredoxin reductase from Plasmodium falciparum.
|
| |
J Biol Chem, 281,
32967-32977.
|
 |
|
|
|
|
 |
S.Graziani,
J.Bernauer,
S.Skouloubris,
M.Graille,
C.Z.Zhou,
C.Marchand,
P.Decottignies,
H.van Tilbeurgh,
H.Myllykallio,
and
U.Liebl
(2006).
Catalytic mechanism and structure of viral flavin-dependent thymidylate synthase ThyX.
|
| |
J Biol Chem, 281,
24048-24057.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
T.C.Mallett,
J.R.Wallen,
P.A.Karplus,
H.Sakai,
T.Tsukihara,
and
A.Claiborne
(2006).
Structure of coenzyme A-disulfide reductase from Staphylococcus aureus at 1.54 A resolution.
|
| |
Biochemistry, 45,
11278-11289.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
E.I.Biterova,
A.A.Turanov,
V.N.Gladyshev,
and
J.J.Barycki
(2005).
Crystal structures of oxidized and reduced mitochondrial thioredoxin reductase provide molecular details of the reaction mechanism.
|
| |
Proc Natl Acad Sci U S A, 102,
15018-15023.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
I.Encío,
D.J.Morré,
R.Villar,
M.J.Gil,
and
V.Martínez-Merino
(2005).
Benzo[b]thiophenesulphonamide 1,1-dioxide derivatives inhibit tNOX activity in a redox state-dependent manner.
|
| |
Br J Cancer, 92,
690-695.
|
 |
|
|
|
|
 |
K.R.Rajashankar,
R.Bryk,
R.Kniewel,
J.A.Buglino,
C.F.Nathan,
and
C.D.Lima
(2005).
Crystal structure and functional analysis of lipoamide dehydrogenase from Mycobacterium tuberculosis.
|
| |
J Biol Chem, 280,
33977-33983.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
M.Deponte,
S.Urig,
L.D.Arscott,
K.Fritz-Wolf,
R.Réau,
C.Herold-Mende,
S.Koncarevic,
M.Meyer,
E.Davioud-Charvet,
D.P.Ballou,
C.H.Williams,
and
K.Becker
(2005).
Mechanistic studies on a novel, highly potent gold-phosphole inhibitor of human glutathione reductase.
|
| |
J Biol Chem, 280,
20628-20637.
|
 |
|
|
|
|
 |
V.Y.Kuznetsov,
E.Blair,
P.J.Farmer,
T.L.Poulos,
A.Pifferitti,
and
I.F.Sevrioukova
(2005).
The putidaredoxin reductase-putidaredoxin electron transfer complex: theoretical and experimental studies.
|
| |
J Biol Chem, 280,
16135-16142.
|
 |
|
|
|
|
 |
A.Argyrou,
M.W.Vetting,
and
J.S.Blanchard
(2004).
Characterization of a new member of the flavoprotein disulfide reductase family of enzymes from Mycobacterium tuberculosis.
|
| |
J Biol Chem, 279,
52694-52702.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
E.Malito,
A.Alfieri,
M.W.Fraaije,
and
A.Mattevi
(2004).
Crystal structure of a Baeyer-Villiger monooxygenase.
|
| |
Proc Natl Acad Sci U S A, 101,
13157-13162.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
L.B.Poole,
P.A.Karplus,
and
A.Claiborne
(2004).
Protein sulfenic acids in redox signaling.
|
| |
Annu Rev Pharmacol Toxicol, 44,
325-347.
|
 |
|
|
|
|
 |
P.A.van den Berg,
A.van Hoek,
and
A.J.Visser
(2004).
Evidence for a novel mechanism of time-resolved flavin fluorescence depolarization in glutathione reductase.
|
| |
Biophys J, 87,
2577-2586.
|
 |
|
|
|
|
 |
S.Y.Reddy,
and
T.C.Bruice
(2004).
Determination of enzyme mechanisms by molecular dynamics: studies on quinoproteins, methanol dehydrogenase, and soluble glucose dehydrogenase.
|
| |
Protein Sci, 13,
1965-1978.
|
 |
|
|
|
|
 |
B.M.Hallberg,
G.Henriksson,
G.Pettersson,
A.Vasella,
and
C.Divne
(2003).
Mechanism of the reductive half-reaction in cellobiose dehydrogenase.
|
| |
J Biol Chem, 278,
7160-7166.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
K.Becker,
S.Rahlfs,
C.Nickel,
and
R.H.Schirmer
(2003).
Glutathione--functions and metabolism in the malarial parasite Plasmodium falciparum.
|
| |
Biol Chem, 384,
551-566.
|
 |
|
|
|
|
 |
S.A.Ensign,
and
J.R.Allen
(2003).
Aliphatic epoxide carboxylation.
|
| |
Annu Rev Biochem, 72,
55-76.
|
 |
|
|
|
|
 |
B.Vergauwen,
F.Van Petegem,
H.Remaut,
F.Pauwels,
and
J.J.Van Beeumen
(2002).
Crystallization and preliminary X-ray crystallographic analysis of glutathione amide reductase from Chromatium gracile.
|
| |
Acta Crystallogr D Biol Crystallogr, 58,
339-340.
|
 |
|
|
|
|
 |
C.A.Bottoms,
P.E.Smith,
and
J.J.Tanner
(2002).
A structurally conserved water molecule in Rossmann dinucleotide-binding domains.
|
| |
Protein Sci, 11,
2125-2137.
|
 |
|
|
|
|
 |
C.A.Haynes,
R.L.Koder,
A.F.Miller,
and
D.W.Rodgers
(2002).
Structures of nitroreductase in three states: effects of inhibitor binding and reduction.
|
| |
J Biol Chem, 277,
11513-11520.
|
 |
|
PDB codes:
|
 |
|
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|
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J.Wang,
M.Ortiz-Maldonado,
B.Entsch,
V.Massey,
D.Ballou,
and
D.L.Gatti
(2002).
Protein and ligand dynamics in 4-hydroxybenzoate hydroxylase.
|
| |
Proc Natl Acad Sci U S A, 99,
608-613.
|
 |
|
PDB codes:
|
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|
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|
|
 |
T.Picaud,
and
A.Desbois
(2002).
Electrostatic control of the isoalloxazine environment in the two-electron reduced states of yeast glutathione reductase.
|
| |
J Biol Chem, 277,
31715-31721.
|
 |
|
|
|
|
 |
A.Gutierrez,
L.Y.Lian,
C.R.Wolf,
N.S.Scrutton,
and
G.C.Roberts
(2001).
Stopped-flow kinetic studies of flavin reduction in human cytochrome P450 reductase and its component domains.
|
| |
Biochemistry, 40,
1964-1975.
|
 |
|
|
|
|
 |
B.Hofmann,
H.Budde,
K.Bruns,
S.A.Guerrero,
H.M.Kalisz,
U.Menge,
M.Montemartini,
E.Nogoceke,
P.Steinert,
J.B.Wissing,
L.Flohé,
and
H.J.Hecht
(2001).
Structures of tryparedoxins revealing interaction with trypanothione.
|
| |
Biol Chem, 382,
459-471.
|
 |
|
PDB codes:
|
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|
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|
 |
D.A.Sanders,
A.G.Staines,
S.A.McMahon,
M.R.McNeil,
C.Whitfield,
and
J.H.Naismith
(2001).
UDP-galactopyranose mutase has a novel structure and mechanism.
|
| |
Nat Struct Biol, 8,
858-863.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
D.Dobritzsch,
G.Schneider,
K.D.Schnackerz,
and
Y.Lindqvist
(2001).
Crystal structure of dihydropyrimidine dehydrogenase, a major determinant of the pharmacokinetics of the anti-cancer drug 5-fluorouracil.
|
| |
EMBO J, 20,
650-660.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
E.Warkentin,
B.Mamat,
M.Sordel-Klippert,
M.Wicke,
R.K.Thauer,
M.Iwata,
S.Iwata,
U.Ermler,
and
S.Shima
(2001).
Structures of F420H2:NADP+ oxidoreductase with and without its substrates bound.
|
| |
EMBO J, 20,
6561-6569.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
T.Sandalova,
L.Zhong,
Y.Lindqvist,
A.Holmgren,
and
G.Schneider
(2001).
Three-dimensional structure of a mammalian thioredoxin reductase: implications for mechanism and evolution of a selenocysteine-dependent enzyme.
|
| |
Proc Natl Acad Sci U S A, 98,
9533-9538.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
D.D.Clark,
J.R.Allen,
and
S.A.Ensign
(2000).
Characterization of five catalytic activities associated with the NADPH:2-ketopropyl-coenzyme M [2-(2-ketopropylthio)ethanesulfonate] oxidoreductase/carboxylase of the Xanthobacter strain Py2 epoxide carboxylase system.
|
| |
Biochemistry, 39,
1294-1304.
|
 |
|
|
|
|
 |
E.J.Crane,
J.I.Yeh,
J.Luba,
and
A.Claiborne
(2000).
Analysis of the kinetic and redox properties of the NADH peroxidase R303M mutant: correlation with the crystal structure.
|
| |
Biochemistry, 39,
10353-10364.
|
 |
|
PDB code:
|
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|
|
|
|
|
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E.Notomista,
F.Catanzano,
G.Graziano,
F.Dal Piaz,
G.Barone,
G.D'Alessio,
and
A.Di Donato
(2000).
Onconase: an unusually stable protein.
|
| |
Biochemistry, 39,
8711-8718.
|
 |
|
|
|
|
 |
G.A.Ziegler,
and
G.E.Schulz
(2000).
Crystal structures of adrenodoxin reductase in complex with NADP+ and NADPH suggesting a mechanism for the electron transfer of an enzyme family.
|
| |
Biochemistry, 39,
10986-10995.
|
 |
|
PDB codes:
|
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|
|
|
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|
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J.Qin,
Y.Yang,
A.Velyvis,
and
A.Gronenborn
(2000).
Molecular views of redox regulation: three-dimensional structures of redox regulatory proteins and protein complexes.
|
| |
Antioxid Redox Signal, 2,
827-840.
|
 |
|
|
|
|
 |
K.Thomazeau,
R.Dumas,
F.Halgand,
E.Forest,
R.Douce,
and
V.Biou
(2000).
Structure of spinach acetohydroxyacid isomeroreductase complexed with its reaction product dihydroxymethylvalerate, manganese and (phospho)-ADP-ribose.
|
| |
Acta Crystallogr D Biol Crystallogr, 56,
389-397.
|
 |
|
PDB code:
|
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|
|
|
|
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A.Claiborne,
J.I.Yeh,
T.C.Mallett,
J.Luba,
E.J.Crane,
V.Charrier,
and
D.Parsonage
(1999).
Protein-sulfenic acids: diverse roles for an unlikely player in enzyme catalysis and redox regulation.
|
| |
Biochemistry, 38,
15407-15416.
|
 |
|
|
|
|
 |
A.Oubrie,
H.J.Rozeboom,
K.H.Kalk,
A.J.Olsthoorn,
J.A.Duine,
and
B.W.Dijkstra
(1999).
Structure and mechanism of soluble quinoprotein glucose dehydrogenase.
|
| |
EMBO J, 18,
5187-5194.
|
 |
|
PDB codes:
|
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|
|
|
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|
 |
B.W.Lennon,
C.H.Williams,
and
M.L.Ludwig
(1999).
Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor.
|
| |
Protein Sci, 8,
2366-2379.
|
 |
|
PDB code:
|
 |
|
|
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C.S.Bond,
Y.Zhang,
M.Berriman,
M.L.Cunningham,
A.H.Fairlamb,
and
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Crystal structure of Trypanosoma cruzi trypanothione reductase in complex with trypanothione, and the structure-based discovery of new natural product inhibitors.
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| |
Structure, 7,
81-89.
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|
PDB code:
|
 |
|
|
|
|
|
 |
L.Flohé,
H.J.Hecht,
and
P.Steinert
(1999).
Glutathione and trypanothione in parasitic hydroperoxide metabolism.
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Free Radic Biol Med, 27,
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O.Fjellström,
M.Axelsson,
T.Bizouarn,
X.Hu,
C.Johansson,
J.Meuller,
and
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(1999).
Mapping of residues in the NADP(H)-binding site of proton-translocating nicotinamide nucleotide transhydrogenase from Escherichia coli. A study of structure and function.
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J Biol Chem, 274,
6350-6359.
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U.H.Danielson,
F.Jiang,
L.O.Hansson,
and
B.Mannervik
(1999).
Probing the kinetic mechanism and coenzyme specificity of glutathione reductase from the cyanobacterium Anabaena PCC 7120 by redesign of the pyridine-nucleotide-binding site.
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Biochemistry, 38,
9254-9263.
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C.Mazza,
R.Breton,
D.Housset,
and
J.C.Fontecilla-Camps
(1998).
Unusual charge stabilization of NADP+ in 17beta-hydroxysteroid dehydrogenase.
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| |
J Biol Chem, 273,
8145-8152.
|
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|
PDB codes:
|
 |
|
|
|
|
|
 |
P.A.van den Berg,
A.van Hoek,
C.D.Walentas,
R.N.Perham,
and
A.J.Visser
(1998).
Flavin fluorescence dynamics and photoinduced electron transfer in Escherichia coli glutathione reductase.
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| |
Biophys J, 74,
2046-2058.
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R.L.Krauth-Siegel,
L.D.Arscott,
A.Schönleben-Janas,
R.H.Schirmer,
and
C.H.Williams
(1998).
Role of active site tyrosine residues in catalysis by human glutathione reductase.
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| |
Biochemistry, 37,
13968-13977.
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S.Schmitz,
M.Martínez-Júlvez,
C.Gómez-Moreno,
and
H.Böhme
(1998).
Interaction of positively charged amino acid residues of recombinant, cyanobacterial ferredoxin:NADP+ reductase with ferredoxin probed by site directed mutagenesis.
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| |
Biochim Biophys Acta, 1363,
85-93.
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A.D.Mesecar,
B.L.Stoddard,
and
D.E.Koshland
(1997).
Orbital steering in the catalytic power of enzymes: small structural changes with large catalytic consequences.
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| |
Science, 277,
202-206.
|
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|
PDB codes:
|
 |
|
|
|
|
|
 |
A.Mattevi,
M.A.Vanoni,
and
B.Curti
(1997).
Structure of D-amino acid oxidase: new insights from an old enzyme.
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| |
Curr Opin Struct Biol, 7,
804-810.
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C.E.Bell,
T.O.Yeates,
and
D.Eisenberg
(1997).
Unusual conformation of nicotinamide adenine dinucleotide (NAD) bound to diphtheria toxin: a comparison with NAD bound to the oxidoreductase enzymes.
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| |
Protein Sci, 6,
2084-2096.
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V.S.Stoll,
S.J.Simpson,
R.L.Krauth-Siegel,
C.T.Walsh,
and
E.F.Pai
(1997).
Glutathione reductase turned into trypanothione reductase: structural analysis of an engineered change in substrate specificity.
|
| |
Biochemistry, 36,
6437-6447.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
C.H.Faerman,
S.N.Savvides,
C.Strickland,
M.A.Breidenbach,
J.A.Ponasik,
B.Ganem,
D.Ripoll,
R.L.Krauth-Siegel,
and
P.A.Karplus
(1996).
Charge is the major discriminating factor for glutathione reductase versus trypanothione reductase inhibitors.
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| |
Bioorg Med Chem, 4,
1247-1253.
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|
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D.V.Lueder,
and
M.A.Phillips
(1996).
Characterization of Trypanosoma brucei gamma-glutamylcysteine synthetase, an essential enzyme in the biosynthesis of trypanothione (diglutathionylspermidine).
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| |
J Biol Chem, 271,
17485-17490.
|
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|
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|
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G.Scapin,
S.G.Reddy,
and
J.S.Blanchard
(1996).
Three-dimensional structure of meso-diaminopimelic acid dehydrogenase from Corynebacterium glutamicum.
|
| |
Biochemistry, 35,
13540-13551.
|
 |
|
PDB code:
|
 |
|
|
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|
 |
G.Van Driessche,
M.Koh,
Z.W.Chen,
F.S.Mathews,
T.E.Meyer,
R.G.Bartsch,
M.A.Cusanovich,
and
J.J.Van Beeumen
(1996).
Covalent structure of the flavoprotein subunit of the flavocytochrome c: sulfide dehydrogenase from the purple phototrophic bacterium Chromatium vinosum.
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| |
Protein Sci, 5,
1753-1764.
|
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|
|
|
|
 |
J.I.Yeh,
A.Claiborne,
and
W.G.Hol
(1996).
Structure of the native cysteine-sulfenic acid redox center of enterococcal NADH peroxidase refined at 2.8 A resolution.
|
| |
Biochemistry, 35,
9951-9957.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
J.Swaving,
J.A.de Bont,
A.Westphal,
and
A.de Kok
(1996).
A novel type of pyridine nucleotide-disulfide oxidoreductase is essential for NAD+- and NADPH-dependent degradation of epoxyalkanes by Xanthobacter strain Py2.
|
| |
J Bacteriol, 178,
6644-6646.
|
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|
|
|
|
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L.Young,
and
C.B.Post
(1996).
Catalysis by entropic guidance from enzymes.
|
| |
Biochemistry, 35,
15129-15133.
|
 |
|
|
|
|
 |
P.M.Kiefer,
K.I.Varughese,
Y.Su,
N.H.Xuong,
C.F.Chang,
P.Gupta,
T.Bray,
and
J.M.Whiteley
(1996).
Altered structural and mechanistic properties of mutant dihydropteridine reductases.
|
| |
J Biol Chem, 271,
3437-3444.
|
 |
|
|
|
|
 |
P.S.Ledvina,
N.Yao,
A.Choudhary,
and
F.A.Quiocho
(1996).
Negative electrostatic surface potential of protein sites specific for anionic ligands.
|
| |
Proc Natl Acad Sci U S A, 93,
6786-6791.
|
 |
|
|
|
|
 |
R.L.Kingston,
R.K.Scopes,
and
E.N.Baker
(1996).
The structure of glucose-fructose oxidoreductase from Zymomonas mobilis: an osmoprotective periplasmic enzyme containing non-dissociable NADP.
|
| |
Structure, 4,
1413-1428.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
S.G.Reddy,
G.Scapin,
and
J.S.Blanchard
(1996).
Interaction of pyridine nucleotide substrates with Escherichia coli dihydrodipicolinate reductase: thermodynamic and structural analysis of binary complexes.
|
| |
Biochemistry, 35,
13294-13302.
|
 |
|
PDB codes:
|
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|
|
|
|
|
 |
S.N.Savvides,
and
P.A.Karplus
(1996).
Kinetics and crystallographic analysis of human glutathione reductase in complex with a xanthene inhibitor.
|
| |
J Biol Chem, 271,
8101-8107.
|
 |
|
PDB code:
|
 |
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|
|
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|
 |
Y.Zhang,
C.S.Bond,
S.Bailey,
M.L.Cunningham,
A.H.Fairlamb,
and
W.N.Hunter
(1996).
The crystal structure of trypanothione reductase from the human pathogen Trypanosoma cruzi at 2.3 A resolution.
|
| |
Protein Sci, 5,
52-61.
|
 |
|
PDB code:
|
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|
|
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|
 |
C.S.Poornima,
and
P.M.Dean
(1995).
Hydration in drug design. 3. Conserved water molecules at the ligand-binding sites of homologous proteins.
|
| |
J Comput Aided Mol Des, 9,
521-531.
|
 |
|
|
|
|
 |
M.L.Cunningham,
and
A.H.Fairlamb
(1995).
Trypanothione reductase from Leishmania donovani. Purification, characterisation and inhibition by trivalent antimonials.
|
| |
Eur J Biochem, 230,
460-468.
|
 |
|
|
|
|
 |
Y.V.Murthy,
and
V.Massey
(1995).
Chemical modification of the N-10 ribityl side chain of flavins. Effects on properties of flavoprotein disulfide oxidoreductases.
|
| |
J Biol Chem, 270,
28586-28594.
|
 |
|
|
|
|
 |
C.B.Lantwin,
I.Schlichting,
W.Kabsch,
E.F.Pai,
and
R.L.Krauth-Siegel
(1994).
The structure of Trypanosoma cruzi trypanothione reductase in the oxidized and NADPH reduced state.
|
| |
Proteins, 18,
161-173.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
K.M.Fox,
and
P.A.Karplus
(1994).
Old yellow enzyme at 2 A resolution: overall structure, ligand binding, and comparison with related flavoproteins.
|
| |
Structure, 2,
1089-1105.
|
 |
|
PDB codes:
|
 |
|
|
|
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|
 |
M.J.Adams,
G.H.Ellis,
S.Gover,
C.E.Naylor,
and
C.Phillips
(1994).
Crystallographic study of coenzyme, coenzyme analogue and substrate binding in 6-phosphogluconate dehydrogenase: implications for NADP specificity and the enzyme mechanism.
|
| |
Structure, 2,
651-668.
|
 |
|
PDB codes:
|
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|
|
|
|
|
 |
M.L.Cunningham,
M.J.Zvelebil,
and
A.H.Fairlamb
(1994).
Mechanism of inhibition of trypanothione reductase and glutathione reductase by trivalent organic arsenicals.
|
| |
Eur J Biochem, 221,
285-295.
|
 |
|
|
|
|
 |
P.R.Mittl,
A.Berry,
N.S.Scrutton,
R.N.Perham,
and
G.E.Schulz
(1994).
Anatomy of an engineered NAD-binding site.
|
| |
Protein Sci, 3,
1504-1514.
|
 |
|
PDB codes:
|
 |
|
|
|
|
|
 |
P.R.Mittl,
and
G.E.Schulz
(1994).
Structure of glutathione reductase from Escherichia coli at 1.86 A resolution: comparison with the enzyme from human erythrocytes.
|
| |
Protein Sci, 3,
799-809.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
C.C.Correll,
M.L.Ludwig,
C.M.Bruns,
and
P.A.Karplus
(1993).
Structural prototypes for an extended family of flavoprotein reductases: comparison of phthalate dioxygenase reductase with ferredoxin reductase and ferredoxin.
|
| |
Protein Sci, 2,
2112-2133.
|
 |
|
|
|
|
 |
S.Bailey,
K.Smith,
A.H.Fairlamb,
and
W.N.Hunter
(1993).
Substrate interactions between trypanothione reductase and N1-glutathionylspermidine disulphide at 0.28-nm resolution.
|
| |
Eur J Biochem, 213,
67-75.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
T.Stehle,
A.Claiborne,
and
G.E.Schulz
(1993).
NADH binding site and catalysis of NADH peroxidase.
|
| |
Eur J Biochem, 211,
221-226.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
A.Mattevi,
G.Obmolova,
J.R.Sokatch,
C.Betzel,
and
W.G.Hol
(1992).
The refined crystal structure of Pseudomonas putida lipoamide dehydrogenase complexed with NAD+ at 2.45 A resolution.
|
| |
Proteins, 13,
336-351.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
J.Peinado,
J.Florindo,
and
J.López-Barea
(1992).
Glutathione reductase from Saccharomyces cerevisiae undergoes redox interconversion in situ and in vivo.
|
| |
Mol Cell Biochem, 110,
135-143.
|
 |
|
|
|
|
 |
K.I.Varughese,
M.M.Skinner,
J.M.Whiteley,
D.A.Matthews,
and
N.H.Xuong
(1992).
Crystal structure of rat liver dihydropteridine reductase.
|
| |
Proc Natl Acad Sci U S A, 89,
6080-6084.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
T.Aboagye-Kwarteng,
K.Smith,
and
A.H.Fairlamb
(1992).
Molecular characterization of the trypanothione reductase gene from Crithidia fasciculata and Trypanosoma brucei: comparison with other flavoprotein disulphide oxidoreductases with respect to substrate specificity and catalytic mechanism.
|
| |
Mol Microbiol, 6,
3089-3099.
|
 |
|
|
|
|
 |
C.Walsh,
M.Bradley,
and
K.Nadeau
(1991).
Molecular studies on trypanothione reductase, a target for antiparasitic drugs.
|
| |
Trends Biochem Sci, 16,
305-309.
|
 |
|
|
|
|
 |
J.Kuriyan,
X.P.Kong,
T.S.Krishna,
R.M.Sweet,
N.J.Murgolo,
H.Field,
A.Cerami,
and
G.B.Henderson
(1991).
X-ray structure of trypanothione reductase from Crithidia fasciculata at 2.4-A resolution.
|
| |
Proc Natl Acad Sci U S A, 88,
8764-8768.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
U.Ermler,
and
G.E.Schulz
(1991).
The three-dimensional structure of glutathione reductase from Escherichia coli at 3.0 A resolution.
|
| |
Proteins, 9,
174-179.
|
 |
|
|
|
|
 |
U.Ermler,
S.Ghisla,
V.Massey,
and
G.E.Schulz
(1991).
Structural, spectroscopic and catalytic activity studies on glutathione reductase reconstituted with FAD analogues.
|
| |
Eur J Biochem, 199,
133-138.
|
 |
|
 |
 |
|
The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
codes are
shown on the right.
|
|